Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5349g00001 ATGGCTCAGAAGGCCGAGAAAAACGACGCCGAGTTCAAGGTCCCCGACTCCATCCCCCCCTGCGCCACCACCTCAATTTCCGAACCTTCTAGATTCTTCGCCGCCACCGCCGACCGGACCGCCTCGTCCGAGCCCAAGCGCGCCGTCAACCGTTGCTCCGGCTGCCGGCGGCGCGTCGGACTCACCGGATTCCGCTGCCGCTGCGGGGACCTCTTCTGCTCCGAGCACCGCTACTCCGACCGCCACGACTGCTCTTACGACTACAAGGCCGCCGGGAGAGAGGCCATCGCCAGGGAAAACCCCGTCGTCAGAGCCGCCAAGATCGTCAAAGTCTGA 336 0.6548 MAQKAEKNDAEFKVPDSIPPCATTSISEPSRFFAATADRTASSEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKAAGREAIARENPVVRAAKIVKV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5349g00001 111 Pfam AN1-like Zinc finger 52 89 IPR000058 GO:0008270
Mupr5349g00001 111 SUPERFAMILY AN1-like Zinc finger 36 105 IPR035896 -
Mupr5349g00001 111 Gene3D - 26 107 IPR035896 -
Mupr5349g00001 111 SMART AN1_Zf_4 52 89 IPR000058 GO:0008270
Mupr5349g00001 111 ProSiteProfiles Zinc finger AN1-type profile. 46 92 IPR000058 GO:0008270
Mupr5349g00001 111 PANTHER AN1-TYPE ZINC FINGER PROTEIN 22 110 - -
Mupr5349g00001 111 FunFam Zinc finger AN1-type containing 6 27 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5349g00001 Mupr-Chr5349 5299 5736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5349g00001 40 111 C2H2 Transcription Factor Family AT3G52800 56.944 9.44e-28 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5349g00001 - - gmx:100794830 188.348