Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5346g00002 ATGGAGAAGGGAGGGGAAGAAGTGAAGTACCGTGGCGTGAGAAGAAGGCCATGGGGTAAGTATGGAGCAGAGATTAGAGACTCAACAAAACCTACGGGGAGACAGTGGTTGGGGACATTTGACACCGCAGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGCTTTGAGGGGTGCTCTTGCAATCCTTAATTTCCCCGATGAGTACCATTCTCATCTCCCTTTCTTGTCATCATCTTCTTCTTCTACTAGTGTCATTGGTACACAGAAGGAAGTTATTGAGCTTGAATATTTGGATAATAAGGTGTTGGAAGACCTTCTTGAGTCAGAAGAGAAGAGAAGGAATGAAGTCTAA 357 0.451 MEKGGEEVKYRGVRRRPWGKYGAEIRDSTKPTGRQWLGTFDTAEEAARAYDRAAIALRGALAILNFPDEYHSHLPFLSSSSSSTSVIGTQKEVIELEYLDNKVLEDLLESEEKRRNEV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5346g00002 118 Gene3D AP2/ERF domain 8 68 IPR036955 GO:0003700|GO:0006355
Mupr5346g00002 118 FunFam Ethylene-responsive transcription factor 2 9 69 - -
Mupr5346g00002 118 PRINTS Ethylene responsive element binding protein signature 10 21 IPR001471 GO:0003700|GO:0006355
Mupr5346g00002 118 PRINTS Ethylene responsive element binding protein signature 33 49 IPR001471 GO:0003700|GO:0006355
Mupr5346g00002 118 SUPERFAMILY DNA-binding domain 9 69 IPR016177 GO:0003677
Mupr5346g00002 118 PANTHER DNA-BINDING DOMAIN 7 83 IPR044808 GO:0003700|GO:0009873
Mupr5346g00002 118 SMART rav1_2 9 72 IPR001471 GO:0003700|GO:0006355
Mupr5346g00002 118 Pfam AP2 domain 9 59 IPR001471 GO:0003700|GO:0006355
Mupr5346g00002 118 CDD AP2 9 68 IPR001471 GO:0003700|GO:0006355
Mupr5346g00002 118 Coils Coil 101 118 - -
Mupr5346g00002 118 ProSiteProfiles AP2/ERF domain profile. 9 67 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5346g00002 Mupr-Chr5346 21777 22133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5346g00002 6 115 AP2-EREBP Transcription Factor Family AT3G23230 58.065 6.08e-40 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5346g00002 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5346g00002 - - gmx:100796977 164.466