Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5346g00001 ATGGAGGAGGCACGTAAGATGGAGCAAGACAAAGAGAAAGGAGGGGAAGAAGTGAGGTACCGAGGGGTGAGAAGGAGGCCATGGGGTAAGTATGGGGCAGAGATTAGAGACCCAACAAAACCTACGGGAAGACAATGGTTGGGGACATTTGACACAGCAGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGGGGTGCTCTTGCAATCCTTAATTTCCCTGATGAGTTCCATTCTCATCTTCCTTTCTTGTCATCATCATCATCATCTTCTTCTTCTACTAGTGTCACTGGAACACAGAGGGAAGTTATTGAGTTTGAGTATTTGGATAACAAGTTATTGACGTTGGACACCTTAGTTCTACTAGCGTATATTGATATTAGATATTATCTCCTCCTAAAAATTTTTCATTTTACTTCTGAGACCTTTGCTATGTAG 447 0.4251 MEEARKMEQDKEKGGEEVRYRGVRRRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIELRGALAILNFPDEFHSHLPFLSSSSSSSSSTSVTGTQREVIEFEYLDNKLLTLDTLVLLAYIDIRYYLLLKIFHFTSETFAM 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5346g00001 148 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Mupr5346g00001 148 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Mupr5346g00001 148 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Mupr5346g00001 148 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Mupr5346g00001 148 PANTHER DNA-BINDING DOMAIN 9 95 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5346g00001 Mupr-Chr5346 6907 9553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5346g00001 16 117 AP2-EREBP Transcription Factor Family AT3G23230 61.062 2.25e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5346g00001 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5346g00001 - - gmx:100807295 159.844