Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5344g00001 ATGGGGAGAGCCCCTTGTGACCAAAATGGACTCAGGAAAGGCGCTTGGACACCTGAGGAAGACAGAAAGTTGATTGCTTATGTCACTAAGTATGGCCACTGGAATTGGCGCTTACTCCCCAAGTTTGCAGGTCTTGCAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGCTGAACTATCTAAGGCCAGATGTCAAAAGAGGGAATTTTAGTCATGAAGAAGAAGAAACCATTATCAAACTTCACCAAAAGCTGGGTAATAGATGGTCAGCAATTGCTGCTAAATTGCCAGGAAGGACAGATAACGATATAAAGAATCACTGGCACACCGCCCTTAAGAAGCGTTGTGAACAGAAGTCAGACGCTAAACGTGGAAGTGGGAAAGCCAATGTTTCCAAGTCAATGGAAAGAATATCAGACAAGTGCAGCAGTGACTCCAATACCTATCCAGTGTCTCCACAACCACAACCATCATCTAGCGGTTACCCCTCTGATGCTGCAGCCGCCACTAACCGTGAAAATTCGGTTGTAGAATGTGGTGATGATGATGGCCTCTGGTTTTTGGACGCATTCACGGAGCCTGTGTGTGCAGATTTCTGGACAGAGCCTTATTTAATTGACAACTCCTATGTTCCGCCCGAGTGTGAACAACCTCAATACTTTAGTCCTATGCTGGACGCAGAACTTTGGAGCCAGAATGATTTTTACGTGCACGAATGGGATGAGGCTTTTTTCTACTAA 738 0.4621 MGRAPCDQNGLRKGAWTPEEDRKLIAYVTKYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPDVKRGNFSHEEEETIIKLHQKLGNRWSAIAAKLPGRTDNDIKNHWHTALKKRCEQKSDAKRGSGKANVSKSMERISDKCSSDSNTYPVSPQPQPSSSGYPSDAAAATNRENSVVECGDDDGLWFLDAFTEPVCADFWTEPYLIDNSYVPPECEQPQYFSPMLDAELWSQNDFYVHEWDEAFFY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5344g00001 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mupr5344g00001 245 FunFam MYB-related transcription factor 12 65 - -
Mupr5344g00001 245 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mupr5344g00001 245 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 163 - -
Mupr5344g00001 245 MobiDBLite consensus disorder prediction 114 168 - -
Mupr5344g00001 245 MobiDBLite consensus disorder prediction 140 168 - -
Mupr5344g00001 245 CDD SANT 15 60 IPR001005 -
Mupr5344g00001 245 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mupr5344g00001 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mupr5344g00001 245 CDD SANT 68 109 IPR001005 -
Mupr5344g00001 245 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mupr5344g00001 245 SMART sant 65 113 IPR001005 -
Mupr5344g00001 245 SMART sant 12 62 IPR001005 -
Mupr5344g00001 245 Gene3D - 68 141 - -
Mupr5344g00001 245 Gene3D - 13 65 - -
Mupr5344g00001 245 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mupr5344g00001 245 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5344g00001 Mupr-Chr5344 6629 9114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5344g00001 1 208 MYB Transcription Factor Family AT2G31180 46.479 3.38e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5344g00001 Myb_DNA-binding 4.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5344g00001 K09422 - gmx:100815765 328.561