Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5343g00001 ATGTCAGGAACCCTAAATCTCATGTCCGTCAGCGGTGCTGGCGGGACTCTCCGGCCACCGACCAGGGTCTCTGTTCGAGCTTTCACGGCGACGGCGGTGGCGGTCGATTCTCGGCGACCGGCGAACCTGTACGAGGTGCTTCGGATAAAGCAGAACGCGTCGGCGGTGGAAATAAAGTTGGCATACCGGAACCTTGCGAAGGTGTATCACCCCGATTCGGTGGTCCGGCGGTCGGAATCGGACGAACGGGACTTCATCGAGATCCACGACGCTTACGAGACGCTGTCGGATCCGTCGGCGAGAGCACTGTATGATCTGTCGCTGATGGCGGCGCGCAGTGGTAGTCGCTCGTTCTCGTCTTTGGTGACTCAGAGTAGATCTTCGAGATTCTGCCAGACCCGGAAGTGGGAAACGGACCAATGCTGGTAG 429 0.5921 MSGTLNLMSVSGAGGTLRPPTRVSVRAFTATAVAVDSRRPANLYEVLRIKQNASAVEIKLAYRNLAKVYHPDSVVRRSESDERDFIEIHDAYETLSDPSARALYDLSLMAARSGSRSFSSLVTQSRSSRFCQTRKWETDQCW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5343g00001 142 CDD DnaJ 42 97 IPR001623 -
Mupr5343g00001 142 Gene3D DnaJ domain 29 128 IPR036869 -
Mupr5343g00001 142 ProSiteProfiles dnaJ domain profile. 42 108 IPR001623 -
Mupr5343g00001 142 SMART dnaj_3 41 100 IPR001623 -
Mupr5343g00001 142 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Mupr5343g00001 142 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 16 142 - -
Mupr5343g00001 142 Pfam DnaJ domain 42 105 IPR001623 -
Mupr5343g00001 142 PRINTS DnaJ domain signature 80 100 IPR001623 -
Mupr5343g00001 142 PRINTS DnaJ domain signature 62 77 IPR001623 -
Mupr5343g00001 142 PRINTS DnaJ domain signature 44 62 IPR001623 -
Mupr5343g00001 142 SUPERFAMILY Chaperone J-domain 41 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5343g00001 Mupr-Chr5343 3105 3533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5343g00001 44 105 C2H2 Transcription Factor Family AT1G74250 43.939 4.31e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5343g00001 - - gmx:100786034 219.55