Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5326g00001 ATGGAAGGAAGAGAAGGGATGAATTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCCTATCACATGGCACCAAGGAGTGAAGCACCAAGCCAAGGTGGTCCTGTTTCTGAAGCAACAGCTGCTGCAGCTATTGGTGTTTCTCCTGTGAGTGTGGGATTTGATGGAACAGCAGTTAAGAAGAAAAGGGGTAGGCCAAGGAAGTATGGGCCAGATGGGTCGGTCACTATGGCATTGTCTCCCATGCCAATCTCATCTTCAGCACCATTCTCTAATGACTTTTCATCCGGGAAGCGGGGAAAATCCCGGGGGATGGAGTACAAGCTGCCAAAAAAAGTTGGAGTGGATCAACTAGGTGACTCTGTTGGTACAAACTTTATGCCCCATATCATTACTGTCAATACTGGCGAGGACATTACGATGAAGGTTATATCTTTTTCCCAACAAGGACCCCGTGCAATATGCATCCTATCTGCCAATGGTGTCATTTCAAATGTTACACTTCGCCAGCCTGATTCTTCTGGGGGAACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACGAGAAGCAGGTCTGGTGGAATGAGCGTTTCATTGTCAAGCCCAGATGGTCGCGTAGTAGGTGGTGGAGTTGCCGGTCTTCTTGTAGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGCTTTTTGCCAAGCAACCATCAAGATCAGAAACCAAAGAAGCCAAAGTCTGATTATGCACCAGCCACCGTCACCCCTGCGATTGCAGTGTCTTCTGCACCACCACCACCACCCCCTACTAATGGTGAAAAGGAGGATGTCATGGGTGGACTCCTCCTGCACAACTCAGCAACAACCCTTAACTCAAGCCTCACTCCTCCCTCGGCCTTTCGCCGAGAAAACTGGGTCAACTTGCACTCCATGACCGACTCGATGAAGTCAGCCACTGACATTAACATATCCTTGCCTGATAGTTGTTGA 1020 0.4931 MEGREGMNSGVTVIGAEAPSAYHMAPRSEAPSQGGPVSEATAAAAIGVSPVSVGFDGTAVKKKRGRPRKYGPDGSVTMALSPMPISSSAPFSNDFSSGKRGKSRGMEYKLPKKVGVDQLGDSVGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNHQDQKPKKPKSDYAPATVTPAIAVSSAPPPPPPTNGEKEDVMGGLLLHNSATTLNSSLTPPSAFRRENWVNLHSMTDSMKSATDINISLPDSC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5326g00001 339 Gene3D - 129 260 - -
Mupr5326g00001 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 247 - -
Mupr5326g00001 339 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Mupr5326g00001 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Mupr5326g00001 339 FunFam AT-hook motif nuclear-localized protein 1-like 129 259 - -
Mupr5326g00001 339 CDD DUF296 129 219 IPR005175 -
Mupr5326g00001 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 301 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5326g00001 Mupr-Chr5326 3626 7973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5326g00001 6 273 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.940 1.51e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5326g00001 - - gmx:100777213 536.569