Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5323g00005 ATGGCCTCTCACCAAGCCACCGTCACCACCGCCACAGCCGCCACTCCCAGCGAAACATCTAACAGCAACAGCAGTGGCAGCAGCAACAAAAGCAAAGCCAAACCCAAAGCAAAAGGCAAAGGTGGCCCCGACAACAACAAGTTTAGGTACCGCGGTGTCAGGCAACGAAGCTGGGGCAAGTGGGTCGCCGAGATCCGCGAACCGCGTAAGCGCACGCGCAAGTGGCTCGGCACCTTCTCCACCGCCGAGGACGCCGCCCGAGCCTATGACCGCGCCGCCCTCATCCTCTACGGTTCCCGCGCCCAGCTAAACCTCCAACCCTCCGGTTCCTCTTCCCACTCTTCCTCTTCGCGTGCCTCTACCTCTACCTCTACCTCTTCCTCTCAAACCCTAAGACCCTTGCTCCCTCGTCCTTCTGGCTTTGGTTACACTTTTTCTTCCTCCGCTTCCAATTTTCCTAAGCCTTTCAACGCCGCCATGCCTTACCCCTACGGTGGCGCGTATAACAGTAGTTACAATTACACCCCGCCGCTGTTATGCCCTAGTAATAATAATATAGTGCAACTTCATCCACATCACTACCGCCGTCCCGATGAAGTGGTGCAAGTGCCGCAACAGTATCAGCAAGCGGAATCTAAAGTGAGTTTGGGTGGGAATATTGTGGATAGTTCTGTTAGATCAACCTCGTACCGAAGGGATAATAATCATGTGCAACATGGTGTTTTGTCGAATGAACCGCAACATGAGAATAGTGTTGTGGATGGAGTGAATTCCGTTGAGGGATCGGTAAATATGAATGATGGGTCTGTGGATCCGGATCTACCGTTGGTGGGGACGGTGGGACTTGGATCTCCGTCAATATGGTCGTTGACGAATGTGGATGATTACAGTACTGATCTAATTTATCTGGTGAGTGACGCTCTGGAAATCTAA 933 0.5263 MASHQATVTTATAATPSETSNSNSSGSSNKSKAKPKAKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAALILYGSRAQLNLQPSGSSSHSSSSRASTSTSTSSSQTLRPLLPRPSGFGYTFSSSASNFPKPFNAAMPYPYGGAYNSSYNYTPPLLCPSNNNIVQLHPHHYRRPDEVVQVPQQYQQAESKVSLGGNIVDSSVRSTSYRRDNNHVQHGVLSNEPQHENSVVDGVNSVEGSVNMNDGSVDPDLPLVGTVGLGSPSIWSLTNVDDYSTDLIYLVSDALEI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5323g00005 310 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 21 235 - -
Mupr5323g00005 310 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 MobiDBLite consensus disorder prediction 1 52 - -
Mupr5323g00005 310 CDD AP2 49 106 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 FunFam Ethylene-responsive transcription factor 2 49 107 - -
Mupr5323g00005 310 MobiDBLite consensus disorder prediction 37 51 - -
Mupr5323g00005 310 MobiDBLite consensus disorder prediction 1 32 - -
Mupr5323g00005 310 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 MobiDBLite consensus disorder prediction 105 133 - -
Mupr5323g00005 310 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Mupr5323g00005 310 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Mupr5323g00005 310 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5323g00005 Mupr-Chr5323 52063 53788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5323g00005 33 297 AP2-EREBP Transcription Factor Family AT2G40220 45.329 1.16e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5323g00005 AP2 9.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5323g00005 K09286 - gmx:100301892 290.812