Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5323g00003 ATGACCGGCGACGACCGCGTGAAGGGTTCGTGGAGTCCTCAGGAGGACGCGACGCTGTTAAAACTGGTGGAGGAGAACGGGGCGCGCAACTGGTCCGTCATAAGCAGCGGCATTCCGGGGCGCTCCGGCAAGTCCTGCCGTCTGCGGTGGTGCAACCAGCTGAGCCCCAAGGTGCAGCACCGTCCGTTTACGCCGGCGGAGGACAAGATTATTATTAATGCGCACGCAAAACACGGAAACAAGTGGGCCACCATCTCGCGCCTCCTCCCTGGCCGCACCGACAACGCCGTCAAGAACCACTGGAACTCCACGCTCCGCCGCCGTCGCGCGGCGGACCAGTCCCCTGCCTCCGCCTCCGCCTCCTCGGCGTCCACGCCCGCCAAGCGTTCCTCTTTGTTCGACACGTGTCAGCCTCTCAAGAAGCCGTGCATTGAAAATGAAACCGAGAAAGATCGACCCGTGGTGGAGTCCTTGAACCTTTTTCCTATCCGGAAAAACACGGAGGATGAAGAAGAAGAAAAAAAGGAAAAGGAAGAGTTTGAAGTAAAGGTTAATAACAAGATTGAGGATCAGAATTACTTTATACAAATGATGCAGCGCATGATAGCGGAAGAAGTTAGAAGTTACGTCGATAGCTTGCGCCACGGCGAAAGGGACAGCCTCTCCCTTGGGTTTGGGTTAGATCTTCATCCAATGTTTCGAAATAAATAA 711 0.5513 MTGDDRVKGSWSPQEDATLLKLVEENGARNWSVISSGIPGRSGKSCRLRWCNQLSPKVQHRPFTPAEDKIIINAHAKHGNKWATISRLLPGRTDNAVKNHWNSTLRRRRAADQSPASASASSASTPAKRSSLFDTCQPLKKPCIENETEKDRPVVESLNLFPIRKNTEDEEEEKKEKEEFEVKVNNKIEDQNYFIQMMQRMIAEEVRSYVDSLRHGERDSLSLGFGLDLHPMFRNK 236
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr5323g00003 236 MobiDBLite consensus disorder prediction 105 131 - -
Mupr5323g00003 236 MobiDBLite consensus disorder prediction 108 131 - -
Mupr5323g00003 236 Gene3D - 61 132 - -
Mupr5323g00003 236 SUPERFAMILY Homeodomain-like 6 101 IPR009057 -
Mupr5323g00003 236 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Mupr5323g00003 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Mupr5323g00003 236 Pfam Myb-like DNA-binding domain 8 54 IPR001005 -
Mupr5323g00003 236 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Mupr5323g00003 236 CDD SANT 10 52 IPR001005 -
Mupr5323g00003 236 PANTHER MYB PROTEIN-RELATED 8 128 - -
Mupr5323g00003 236 Coils Coil 163 190 - -
Mupr5323g00003 236 SMART sant 59 107 IPR001005 -
Mupr5323g00003 236 SMART sant 7 56 IPR001005 -
Mupr5323g00003 236 FunFam MYB transcription factor 8 59 - -
Mupr5323g00003 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 54 IPR017930 -
Mupr5323g00003 236 ProSiteProfiles Myb-like domain profile. 3 54 IPR001005 -
Mupr5323g00003 236 CDD SANT 62 105 IPR001005 -
Mupr5323g00003 236 Gene3D - 7 59 - -
Mupr5323g00003 236 FunFam Transcription factor MYB44 62 108 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr5323g00003 Mupr-Chr5323 34869 35579 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5323g00003 5 161 MYB Transcription Factor Family AT5G67300 52.096 2.01e-53 172
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5323g00003 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5323g00003 - - gmx:102661292 290.426