Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5323g00002 ATGGAAATGGAAAGTTACTACTATTCTTGCTGGCCTCTTGCCAATGCCACCAACGTGGACTCTGCACCAAACAGTGATCAATTATCTCCCTTTTCAGTCCCAACACAAACACAAACACTCCCTCTTGCTTCTGACCCTTCCTCTCTTCAATTTGGTGAGTTCCCTTCTTGGCCTGCACCCCTTGAAGATAGAGCTGTTACTGCTTCCAAGAGCCACAGCCAAGCAGAGAAAAGGCGCAGGGACAGGATCAATGCACAGCTTGCAACTCTCAGAAAACTCATTCCCAAGTCTGATAAGATGGACAAGGCAGCACTACTAGGAAGTGTGGTAGACTATGTGAAAGATCTAAAGCGAAAAGCCAGTGATGTCAACAGAGCCACTACTGTTCCAACTGAAACTGATGAAGTAACAATTGACTACCACCAAGCTCAAGATGAAAGCTACAGAAAAGTGATAAAAGCTTCAGTTTGCTGCGATGATCGACCAGAACTGTTCCCTGAGCTAATCCAAGTTCTCAAAAGGTTGAGACTCACAGCAGTTAAGGCTGACATAGCCAGTGTGGGTGGCAGAATCAAAAGCATATTGGTTCTTTGCTCAAAGGATAGTGAAGAGGGTGCTAGTGTTTGCCTTACCACTCTCAAACACTCCCTTAAATCAGCTGTGAACAAAGTTGCCTCGTTATCTGTGGCAACTAATTGTCCCGCTAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCTCATCACGTACAATAA 753 0.4515 MEMESYYYSCWPLANATNVDSAPNSDQLSPFSVPTQTQTLPLASDPSSLQFGEFPSWPAPLEDRAVTASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDYVKDLKRKASDVNRATTVPTETDEVTIDYHQAQDESYRKVIKASVCCDDRPELFPELIQVLKRLRLTAVKADIASVGGRIKSILVLCSKDSEEGASVCLTTLKHSLKSAVNKVASLSVATNCPARSKRQRFFLPSHHVQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5323g00002 250 MobiDBLite consensus disorder prediction 22 45 - -
Mupr5323g00002 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Mupr5323g00002 250 Gene3D - 62 125 IPR036638 GO:0046983
Mupr5323g00002 250 CDD ACT_UUR-ACR-like 155 190 - -
Mupr5323g00002 250 CDD bHLH_AtAIG1_like 62 139 - -
Mupr5323g00002 250 PANTHER TRANSCRIPTION FACTOR BHLH30 34 247 IPR045847 GO:0003700|GO:0006355
Mupr5323g00002 250 Pfam Helix-loop-helix DNA-binding domain 70 116 IPR011598 GO:0046983
Mupr5323g00002 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 124 IPR036638 GO:0046983
Mupr5323g00002 250 SMART finulus 73 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5323g00002 Mupr-Chr5323 24184 25817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5323g00002 20 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 42.683 3.95e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr5323g00002 HLH 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5323g00002 - - gmx:100306102 397.127