Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5322g00003 GAGCAAAACCAAAAACACAAGATAACGAAGGACAAAACTTGCAATGATCATCGGACTGAAAAAGTACAACCTCTTACCTTGTGGTCTAAACCTCTTTGTAATTGTAATCTTTGCTCCTCATCATTCATGGCTTTGAACATGATGCTTCTTCTTCTTGTGAGCCTTGTTGTTTTACAAAGTTTTGTAATACCAACCTGCTATAGCCAGACCAATATTGAAACTTTTTATCCAATCCAAACTCAAGAACCACCCTTCACAACTCAACCTCTTGAGCCACCACCAAAGCCACAAGCATCACCACCATCACCAGGACCAGTGGTTGCATCAGAAACTTCTTCATCAAGCAGAAAGATAGCAACAGCTGTGGCTGCAACTGCAGCAAGTACTCTAGTTATTTCTGGTTTGCTTTTCCTCTTGATGCAAAGGTTCAGAGCAAGGAGGAGAAAGAAGGTAACAACAAACACTGCTTCTTCTGTGGATAGGCGTGTGGTGCCCCAGGTAAACGTGAAGGGATTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGTAAAAACTCAACAGATAATGATTTCAAAAGGGGGGTCTTGCATAGCCCCATAGAGAAAAAAGAAGATGATCATGAGGGGAATCAAGGGAAAAGATCTGAGTCCATTCAAGAAATTCCTCTTCTTAGTGGAAGATCTTCAACTTCTCACATGAATATATTTCTTCCAGAAGAGTCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCTCTCTTGGAGGCTCTCATTCTCAAACATCTTCTCCACCTTTTACCCCTTCATCACCAAAACCAATCTCCACTTTTTTCTCATCAATTCCACAAATGACAAGTCCTGCACCACCAATTCCCCCACCAACAATACCTGATGGAAAGAATCAAGCACCACCACCACCACCACCACCACCACCTCCTCCTCCTCCACCAATCCTAGATAAAAAGAACTCAGCAGCACCTCCAGCACCACCAGCACCTCCTCCACCAATCCCAAATAAAAAGAACTCAGTAGCAGCACCACCTCCTCCACCAATTCCTCCTAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAAGCAAGTGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAAAACACTAGGTACCACAGGTAAGCAAGGGAACACTTCAGCTGAGGTAAAATTGAAGCCATTACATTGGGATAAGGTGAACACCAACCTTGATCACTCTATGGTGTGGGACAAAATTGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTTAGTTGCCACCAACACAAATGACAATGCTCCAAAAGGAAATAACTCAATGAGTCCTAGCAGGGAAGCTTTGGCTCCATCAGCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCCATTGTTTTGAAGTCTCTGGCAGTCTCACGTAAAGAAATCATCGATGCACTGGTTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGGTAGAGTATCACCAACAGAAGAAGAGGAGTCACTCATACTTGCATACGAAGGAGACCCTTCAAAACTTGCTGCAGCTGAGTCTTTCTTACATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAACGCTTGAATGCCTTGCAATTCAGGTTGGATTATGACTCCGAGATTGTGGAAATCAAGGAGTTTCTGCAGATCCTGGAGCTGGGGTGCAAGGAGCTTCGAAACCAAGGAATGTTTGTGAAGCTTCTTGAGGCAGTGCTTAAGGCTGGAAACCGCATGAATGCAGGTACTCATAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTTAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGATCTGAAGGAAAACGTGCGGTTCTTAACCGCAATCACAGTTTCAGTCGTAGTAATAGTAGGATTAGCAACAACAGTGGAGACTCTCAGGACTCTTGTGCTTCAAATGAGCAAAGACAAAGGGAATACATAACCTTAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAGTTTTCCAATGTAAAGAAAGCTGCGGTTACAGATTACAGCAGTTTCGTTGGTTCAATCTCAGCACTCTCAACAAGGATTTTTGAGATTAGAAGACTAGTTTCCCAGTGTGGGAATGACAAGGGAGGGAACTTTGTGAGAGAAATGAACCATTTTCTTGAAAATGCTGAGGAGGAACTGAGATTGGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTGTGAGAAGAACAACGGATTATTATCAAGGAGGAGCTTCAAAAGAGAGTGCAGAACACCCTCTTTATCTATTTACCATAGTTAAGGATTTTCTAGGAATGGTTGATCAAGCATGTATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCT 2502 0.4345 EQNQKHKITKDKTCNDHRTEKVQPLTLWSKPLCNCNLCSSSFMALNMMLLLLVSLVVLQSFVIPTCYSQTNIETFYPIQTQEPPFTTQPLEPPPKPQASPPSPGPVVASETSSSSRKIATAVAATAASTLVISGLLFLLMQRFRARRRKKVTTNTASSVDRRVVPQVNVKGLIVDEDGLDVVYWRKLEGKNSTDNDFKRGVLHSPIEKKEDDHEGNQGKRSESIQEIPLLSGRSSTSHMNIFLPEESYTIMRIPPPAPPPSLGGSHSQTSSPPFTPSSPKPISTFFSSIPQMTSPAPPIPPPTIPDGKNQAPPPPPPPPPPPPPPILDKKNSAAPPAPPAPPPPIPNKKNSVAAPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPTPIEKTLGTTGKQGNTSAEVKLKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGLVATNTNDNAPKGNNSMSPSREALAPSANAFLLDPRKSQNIAIVLKSLAVSRKEIIDALVDGQGLNTDTIEKLGRVSPTEEEESLILAYEGDPSKLAAAESFLHHILKAVPSAFKRLNALQFRLDYDSEIVEIKEFLQILELGCKELRNQGMFVKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSFSRSNSRISNNSGDSQDSCASNEQRQREYITLGLPVVGGISSEFSNVKKAAVTDYSSFVGSISALSTRIFEIRRLVSQCGNDKGGNFVREMNHFLENAEEELRLVREEQTRVMQLVRRTTDYYQGGASKESAEHPLYLFTIVKDFLGMVDQACIEIARNMQKRKTP 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5322g00003 834 PANTHER FORMIN-RELATED 334 828 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mupr5322g00003 834 Coils Coil 756 783 - -
Mupr5322g00003 834 Gene3D Formin, FH2 domain 419 833 IPR042201 -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 86 103 - -
Mupr5322g00003 834 SUPERFAMILY Formin homology 2 domain (FH2 domain) 477 832 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 194 220 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 194 238 - -
Mupr5322g00003 834 SMART it6_source 398 832 IPR015425 -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 293 379 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 221 238 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 380 403 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 670 690 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 83 111 - -
Mupr5322g00003 834 MobiDBLite consensus disorder prediction 250 406 - -
Mupr5322g00003 834 Pfam Formin Homology 2 Domain 404 817 IPR015425 -
Mupr5322g00003 834 ProSiteProfiles Formin homology-2 (FH2) domain profile. 398 834 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5322g00003 Mupr-Chr5322 19779 22362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5322g00003 380 833 FH2 protein (formin) Gene Family AT1G70140 56.703 1.24e-175 523