Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5314g00001 ATGGAAGAAGCACTGCGTCGTCTCAACGGAATGGCCCCGATTCAAGAACCCGACATCACCTCCGACCACCCCCCAAAGAAATGCGCCACCAAGCGCGCGCTCCGCGAAACTGCTAACTCCGGCACTGCCATAAGGTACCGCGGTGTCCGCCGCCGCCCGTGGGGTCGCTACGCCGCTGAGATTCGCGACCCGCAGTCCAAGGAGCGCCGCTGGCTGGGCACCTTCGACACGGCGGAGGAGGCCGCCTGCGCCTACGACTGCGCCGCCCGGGCCATGCGCGGCGTCAAGGCCAGAACCAACTTTGTCTACCCTGACGCCGCCGAGCCGCACCTCTTCCAACCCTTCAGCATCCCGAAGCAGTTCCACGTCAGCAGGTTCGGCCAGAACCCAAATTTGGGAGGTGACTTTTCCGCATCTTCAAACCAGCACAACAACGCTTCTTCCCTCAACATGCTCCTCTTTCGCGACTTCCTCAACTCTTCTTCAAACCCGTGTTTGCTTTCTTCTTCTTCTTCTTCTCAACAGTTTCATAATAATAACAAGCCTGCTACTGGTTATGTAAACTCTTCATCTTTATCTTCTTCCGCGACTAACTGTCTTCAAGGCTGCTGTGTTGGCAACAACGCTAATATTATTAATGCCAATAACGGAACAGAAGTCGTTGAAACTATTGACGAAGATTCCGAATTTTTCCCGCGTGAATCTCCCGATTCTGGGTTACTGGAAGAGATAGTTCATAAGTTCTTGCCAAAATCAAAGCCCAAGAACGAGACTTCGACTTCGTCCGTTTCCGAGTCGCTTCCTCAACCAATATTTGATCACAGGGTTTTTTCCGCCACCAGGGGTTATGATGACACGAGGATGAGGGTTCCGAAGATGGAAGGTTTCGGTGTCTCTTACGATTCTCCCATGCAGCAATTTGAAGCTCTTAATGGGTTTAATGGGTTCAACACCATGCAGGGTAGGGAAAACCCTAGCGGAAATGGTATTGGAGACTGGAGAGTCTTATGGGAGAAAGTGAAGCACTAA 1029 0.5228 MEEALRRLNGMAPIQEPDITSDHPPKKCATKRALRETANSGTAIRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAAEPHLFQPFSIPKQFHVSRFGQNPNLGGDFSASSNQHNNASSLNMLLFRDFLNSSSNPCLLSSSSSSQQFHNNNKPATGYVNSSSLSSSATNCLQGCCVGNNANIINANNGTEVVETIDEDSEFFPRESPDSGLLEEIVHKFLPKSKPKNETSTSSVSESLPQPIFDHRVFSATRGYDDTRMRVPKMEGFGVSYDSPMQQFEALNGFNGFNTMQGRENPSGNGIGDWRVLWEKVKH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5314g00001 342 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Mupr5314g00001 342 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Mupr5314g00001 342 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Mupr5314g00001 342 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Mupr5314g00001 342 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Mupr5314g00001 342 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Mupr5314g00001 342 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Mupr5314g00001 342 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 213 - -
Mupr5314g00001 342 MobiDBLite consensus disorder prediction 1 34 - -
Mupr5314g00001 342 FunFam Ethylene-responsive transcription factor 2 45 103 - -
Mupr5314g00001 342 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5314g00001 Mupr-Chr5314 3494 5312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5314g00001 44 329 AP2-EREBP Transcription Factor Family AT1G24590 38.225 1.79e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr5314g00001 AP2 6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5314g00001 - - aprc:113860142 384.8