Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5306g00001 GACCGAAACGACTATAGTATACTTTATAAAGAAAAAATTTCATTCGGACACAAGGTCCTTAAGTTGTTGAGCACTTCATCCCATAACATTGTGCCAATTATGGGATCCTTCTTCAGTTGCTGCGGCTCAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGCGTAGTTAACAATTCATGGAGAATATTCACATACAAGGAATTGCATGCGGCGACCAACGGATTCAGCGATGATAACAAGCTTGGTGAAGGTGGTTTTGGAAGTGTGTATTGGGGAAGAACAAGTGATGGTCTTCAGATAGCGGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTCAGGCACAAAAATTTGCTGGGTCTTAGGGGGTATTGTGTTGGGGATGATCAACGGCTCATAGTCTACGATTACATGCCAAACCTCAGTCTACTTTCTCATCTCCATGGCCAGTTTTCTGTTGAAGTGCAACTCACCTGGCAAAGGAGAATCAAGATTGCAATTGGCTCCGCAGAAGGCCTTCTGTACTTGCATAGCGAGGTCACACCCCACATCATCCATAGGGACATCAAAGCAAGTAATGTGCTTCTGAATTCAGACTTCGAGCCTCTAGTTGCGGATTTTGGGTTCGCAAAGCTAATCCCAGAAGGGGTCAGCCACATGACTACCCGTGTGAAGGGTACCTTAGGATACTTGGCACCTGAATATGCCATGTGGGGAAAGGTCTCCGAAAGTTGTGATGTCTATAGCTTTGGAATTCTTCTATTAGAACTTGTAACCGGTAGAAAGCCCATAGAGAAGCTCCCGGGTGGGCTTAAGAGAACAATAACAGAGTGGGCCGAGCCTCTAATAACCAAAGGAAAGTTCAGGGATCTAGTGGATCCAAAACTCAGAGGGAACTTCGATGAAAACCAAGTCAAACAAGCAATCAATGTGGCTGCTCTTTGTGTGCAGAGTGAGCCCGAGAAGCGGCCCAACATGAAGCAAGTGGTTAACCTTCTGAAAGGGTATGAATCTGATGAGAAAGTCACCACGATGAGGATAGATAGCATCAAGTACAATGAAGAACTATTGGCATTTGATCAGCCTAGTGATGATGACAACGATGATGATGCAACCGCTAGCTATGGTGTTTTCAGTGCCATTGAAATCCAAAAGATGAAGGATCCATACAACCGCGATGATAACAAGAAAATAATTGGC 1239 0.4447 DRNDYSILYKEKISFGHKVLKLLSTSSHNIVPIMGSFFSCCGSEKVEEVPTSFGVVNNSWRIFTYKELHAATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFSVEVQLTWQRRIKIAIGSAEGLLYLHSEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGKFRDLVDPKLRGNFDENQVKQAINVAALCVQSEPEKRPNMKQVVNLLKGYESDEKVTTMRIDSIKYNEELLAFDQPSDDDNDDDATASYGVFSAIEIQKMKDPYNRDDNKKIIG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5306g00001 413 CDD STKc_IRAK 81 348 - -
Mupr5306g00001 413 SUPERFAMILY Protein kinase-like (PK-like) 59 355 IPR011009 -
Mupr5306g00001 413 FunFam PTI1-like tyrosine-protein kinase At3g15890 151 363 - -
Mupr5306g00001 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mupr5306g00001 413 SMART serkin_6 75 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5306g00001 413 FunFam PTI1-like tyrosine-protein kinase At3g15890 47 150 - -
Mupr5306g00001 413 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Mupr5306g00001 413 PANTHER OS01G0253100 PROTEIN 48 354 - -
Mupr5306g00001 413 Gene3D Transferase(Phosphotransferase) domain 1 151 369 - -
Mupr5306g00001 413 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Mupr5306g00001 413 ProSiteProfiles Protein kinase domain profile. 75 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5306g00001 413 Pfam Protein tyrosine and serine/threonine kinase 78 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5306g00001 Mupr-Chr5306 2036 3617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5306g00001 34 377 Trihelix Transcription Factor Family AT1G70460 44.199 7.69e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mupr5306g00001 PK_Tyr_Ser-Thr 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5306g00001 - - gsj:114393039 723.776