Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5304g00001 ATGTATTCCTCAAATACCTCCCTCAACGGCAATGACCTAATCTCGTACCCTAACCAACCATTTTGCTTTAGGCCTTTTTCCTTTGAAAGCAACCCAACTAATTCTTCAAAAGAACAATCCAATTCCAATTACGCCCTTCCTCCTACTCCTCCTTTGTCCTTTGTCCAATCTCCCTTTGACGAAAATATCTTCTTTGAACAACACCATGACTTGCTCTTACTTCACCAGTCACTAGCCGACTCTGGCGTCTTCAAAAACCTTGACGTTGCGGCTGAAATCTTGCCAATTCCTTCCCCCGCCACCACGATGGAGCACACTCCAAGGAAGAGATCCAGCAAGAGAGACCGCCACAGTAAGATCAACACGGCACGAGGCCTTAGGGATCGAAGAATGAGGTTGTCCCTCGAAGTTGCAAAGAGGTTTTTCGGCCTCCAAGACATGCTAGGCTTTGACAAGGCCAGCAAAACCGTGGAGTGGTTACTAAACCAAGCAAAGGTTGAAATCAAACAACTTGCCAGGGAAAAAAGCAGCGTTGGTGGTGCCAAGAGTGCATCCTCAACTTCGGAATGCGAAGGGGTGTCTTGCTTGGACGAGGTTGTCGTGAGTGGAGTACTTAACGAGGAGCAAGAGAGGGAGCCACACGTCAAGAGAAGAACAACCAAAGTTTGTAGAAAGAGTGCATTCAATCCTATTGGCAAGGAATCGAGGGAAAAGGCAAGAGAAAGGGCGAGAGAAAGAACAAGAGAGAAGATGAAGAGTCGAAGAGTTCTAGCTGATCCATCAAACGTGAACCGTTTGAGTTCTTGGAACCCCTTTGAAACCGTTGAAGACTCTGCGGGTACTCAGAGCCAAAGCGTGAATCATCCTTCCTTGGATATGCACCTTGCTGAAGCTGAAGAACCTGCAAGTTCTCACGCGAAGGAGCATTTGGGACAAGTAGAGGACATGGCGCATGAAGATAATTCTTTTGTGATCATGAGCAAGTGGAACCAAATCATGTTCATGACTTCTCTCAACAACCTTCAGGAAAAATTCCGTCCTTGGGAAAACATTGGGAAGCCTACAACAATCCCATCTGATTAA 1083 0.4654 MYSSNTSLNGNDLISYPNQPFCFRPFSFESNPTNSSKEQSNSNYALPPTPPLSFVQSPFDENIFFEQHHDLLLLHQSLADSGVFKNLDVAAEILPIPSPATTMEHTPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREKSSVGGAKSASSTSECEGVSCLDEVVVSGVLNEEQEREPHVKRRTTKVCRKSAFNPIGKESREKARERARERTREKMKSRRVLADPSNVNRLSSWNPFETVEDSAGTQSQSVNHPSLDMHLAEAEEPASSHAKEHLGQVEDMAHEDNSFVIMSKWNQIMFMTSLNNLQEKFRPWENIGKPTTIPSD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5304g00001 360 MobiDBLite consensus disorder prediction 230 256 - -
Mupr5304g00001 360 Pfam TCP family transcription factor 112 253 IPR017887 -
Mupr5304g00001 360 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 82 303 IPR005333 GO:0003700
Mupr5304g00001 360 ProSiteProfiles TCP domain profile. 113 171 IPR017887 -
Mupr5304g00001 360 ProSiteProfiles R domain profile. 233 250 IPR017888 -
Mupr5304g00001 360 MobiDBLite consensus disorder prediction 98 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5304g00001 Mupr-Chr5304 11339 12734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5304g00001 109 247 TCP Transcription Factor Family AT3G18550 46.203 6.15e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr5304g00001 TCP 2.2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5304g00001 - - gmx:100803669 514.612