Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5280g00001 ATGACTACCCTTCTTTCTCCACAACCTAAGGTTTTGCAAACTAACCCACAAGTTTTGACCACATTTGAAGGAGATGGCATTAAGTTAACAGAAATCAGTGGAAGTGTTCAGGGAGAGAAGGAGGACATAACAGTGACATGGGATAATTTGTGGGTCAGTGTTCCAAGTGGAAAGAAAAAGAAGTCAATTCTGCAGAGTCTTACAGGTTATGCCAGGCCAGGAAGGATTTTGGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTGAACTCAGACATGAAGCAGACAGGGAAGATTCTAATCAATGGCCAGAAACAAGCACTGGCCTATGGGACATCGGGCTATGTGACACAAGATGATGCTATGCTGTCATGTTTAACAGCTGGCGAAACATTATACTACTCAGCTCAGCTCCAATTTCCAAACTCTATGTCTATAGCAGAGAAGAAGGAACGAGCAGATATCACACTGAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGAGTTCAAAGGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAGATTCTAACACGCCCCAGACTTCTCTTCCTTGATGAACCAACTAGTGGCCTTGATAGTGCAGCTTCCTATTATGTTATGACTGGAATTGCAAGTCTAAATAAAAGAGATGGTCTTCAAAGGACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAGTTTTTGAACTTTTCCATGACCTCTATCTTCTGTCTTCTGGTGAAACAGTATATTTTGGACAAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGCCCGACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGTAAGGGAGTACCTACAGAAGAAGCAATTGATATCCTTGTAAAGTCTTATAGATCGTCTCAAATTAGAAAACAAGTTAACAAGGAAGTGGAAAAAATAGGTGAAAGTGATTCCGGGGCAGTAAGGAAGCAGAGGATTCATGCTGCATTTATCACTCAATGCCTTGTTCTTATACGAAGATCTTCCTTGCAATTGTTTCGTGACATGAGCAATTACTGGTTACGTTTAGTTGTCTTTATTGTAATAGCTATAAGCATAGGCTCTATCTTCTATGACATAGGCACAAGTAATGGATCTATTGTGGGGAGAGGTTCGTTGCTCATATTTTTTGTTTCAGTTCTGAGTTTCATGACCCTTGTTGCTGGATTCTCTCCACTTTTAGAGGAAATAAAGGTATTTGAACGAGAGAGATTGAATGGACACTATGGTATAACGGCATTTCTAATAGGCAACATACTATCTGCTGTTCCTTACATTCTAATGATATCTCTTATTCCTGGTGGAATAGCTTACTACCTTTGTGGGATGCACAAAGGACTAGAACGCTTCTTGTTCTTCACTAGTATGCTATTTGCCATAGTGATGTGGGTGGAGAGCCTTATGTTAGTTGTTGGGAGTATCTCCCCAAATTATGTAATAGGCATGTTCCTTGCTGGTGGAGTTGAAGGACTCATGATTTTAACAGGTGGATTCTATCGACTGCCAAATGATCTTCCAAAACCATTATGGAAATACCCTTTCTACTATGTTTCCTTTCTCAAGTATGCCTTCCAAGGATTATTCAAGAACGATTTTGATGGCTTAACATTTTCTATAGACCAAGATGGAGGCACCAGAACCATTAGTGGTAGACAAGTGCTAACTGACACATGGCAAGTGCAAATGGGTCACTCTAAGTGGGTGGATCTTGCTATCCTGTTTGGAATGATTGCTCTGTATCGACTTCTATTCTTAGCCATCACCAAGTGCAAGGAGAAGCTCAAGCCTTTTTGTGCATCCATTAGTTCTCTTCCACCATAA 1962 0.4118 MTTLLSPQPKVLQTNPQVLTTFEGDGIKLTEISGSVQGEKEDITVTWDNLWVSVPSGKKKKSILQSLTGYARPGRILAIMGPSGCGKSTLLDALAGRLNSDMKQTGKILINGQKQALAYGTSGYVTQDDAMLSCLTAGETLYYSAQLQFPNSMSIAEKKERADITLREMGLQDAINTRVGGWSSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMTGIASLNKRDGLQRTIVASIHQPSSEVFELFHDLYLLSSGETVYFGQASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKGVPTEEAIDILVKSYRSSQIRKQVNKEVEKIGESDSGAVRKQRIHAAFITQCLVLIRRSSLQLFRDMSNYWLRLVVFIVIAISIGSIFYDIGTSNGSIVGRGSLLIFFVSVLSFMTLVAGFSPLLEEIKVFERERLNGHYGITAFLIGNILSAVPYILMISLIPGGIAYYLCGMHKGLERFLFFTSMLFAIVMWVESLMLVVGSISPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPFYYVSFLKYAFQGLFKNDFDGLTFSIDQDGGTRTISGRQVLTDTWQVQMGHSKWVDLAILFGMIALYRLLFLAITKCKEKLKPFCASISSLPP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5280g00001 653 FunFam ABC transporter G family member 11 43 330 - -
Mupr5280g00001 653 Pfam ABC transporter 66 215 IPR003439 GO:0005524
Mupr5280g00001 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 281 IPR027417 -
Mupr5280g00001 653 CDD ABCG_EPDR 43 272 - -
Mupr5280g00001 653 Pfam ABC-2 type transporter 247 313 IPR043926 GO:0140359
Mupr5280g00001 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 38 647 - -
Mupr5280g00001 653 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524|GO:0016887
Mupr5280g00001 653 Gene3D - 34 285 IPR027417 -
Mupr5280g00001 653 SMART AAA_5 73 266 IPR003593 GO:0016887
Mupr5280g00001 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 290 IPR003439 GO:0005524
Mupr5280g00001 653 Pfam ABC-2 type transporter 366 577 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5280g00001 Mupr-Chr5280 13138 16124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5280g00001 10 229 Calmodulin-binding Proteins AT2G36910 27.511 8.07e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5280g00001 K05681 - gmx:100790102 1139.79