Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5278g00006 ATGGAAGGAAACTATCTGACCAGAAACACGCATAAAGGGTTTGAGGAGCATTCATGGGGAAGTTCATGGCCTGCTAGAAACTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAAGTCTGCTCAAGCCTTGGGTGGTCACATGAATGTTCACAGAAGGGATAGGGCAAGATTGAGATCTTCATCCTTACCCTCATCATCATGGGCTTCTGAGTGTCCTAAACCTAACCCTAGCATTAAGCCTAACCCAACTCATATTTCACCCTCCTCTTCACCATCATGTCTATCTAATAAGCTTTTGAATTGTGCTCATATTTCTCCACTTTATGGCCCTTCTTTGACTTTGTCTTCTTCACTGATCCAAGCTTCTCCTAATGGAGATAAGAAACCAAGACTTGCATCTTCTCAGCTTCTTCCTCTTTCGATTCCTCAAAGCGGCGGGGAAATTAAGTTGAGTAAGAACATAGGGAGTGGTTTAGGAGTTGAAGAAGTACAGGGTTGTGCAATGGGGGAGGAACACAAGGTTTTCAAGAGTAGTGTGCATAACATCAAGCTGGAGTTGGGAATAGGGTTGCTTAAACAACCAAAGGAGAAGTGGGGTGGGTGTACAACACAAGCTGCCAAAAGTGCAGTTCTAGTGAAAGATGAGGAATGGGTTAAAGTAAGCTAG 666 0.4369 MEGNYLTRNTHKGFEEHSWGSSWPARNYACSFCKREFKSAQALGGHMNVHRRDRARLRSSSLPSSSWASECPKPNPSIKPNPTHISPSSSPSCLSNKLLNCAHISPLYGPSLTLSSSLIQASPNGDKKPRLASSQLLPLSIPQSGGEIKLSKNIGSGLGVEEVQGCAMGEEHKVFKSSVHNIKLELGIGLLKQPKEKWGGCTTQAAKSAVLVKDEEWVKVS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5278g00006 221 Coils Coil 221 221 - -
Mupr5278g00006 221 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mupr5278g00006 221 PANTHER OS07G0101800 PROTEIN 9 127 - -
Mupr5278g00006 221 Gene3D Classic Zinc Finger 7 72 - -
Mupr5278g00006 221 SUPERFAMILY beta-beta-alpha zinc fingers 25 54 IPR036236 -
Mupr5278g00006 221 Pfam C2H2-type zinc finger 28 52 - -
Mupr5278g00006 221 SMART c2h2final6 28 50 IPR013087 -
Mupr5278g00006 221 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mupr5278g00006 221 MobiDBLite consensus disorder prediction 45 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5278g00006 Mupr-Chr5278 42680 45213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5278g00006 15 72 C2H2 Transcription Factor Family AT2G37740 62.903 6.87e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5278g00006 zf-C2H2_6 7.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5278g00006 - - gmx:102660083 255.373