Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5271g00004 ATGGCTCCAATGAGTCTCCCACCTGGGTTTAGGTTCCACCCCACTGATGAAGAGCTTGTTGCTTACTACTTGGAAAGAAAAATAACAGGTCGTTCGATAGAGCTTGACATCATCGCTGAAGTTGATTTATACAAGTGCGAACCTTGGGATTTGCCAGATAAGTCTTTCCTCCCAAGCAAGGACATGGAGTGGTACTTTTACAGTCCTAGGGACAGGAAGTACCCAAATGGGTCAAGAACTAACAGGGCAACACAAGCTGGATACTGGAAAGCTACTGGGAAAGATAGGCCAGTGCACACTCAAAAGAAGCCAGTTGGCATGAAGAAGACATTGGTGTACTACAAAGGTAGAGCACCACATGGGATTAGAACCAACTGGGTTATGCATGAATACCGCTTAATTGAATCAGTACCTGGTGCTGCTCTTTCATCTTTGAAGGATTCCTATTCGTTGTGTCGCATTTTCAAGAAGACGATTCAAATTCCAGCAAAACCTAAAGAAGGAGAACAAGCTGAGAATGCCAAGAAGGAATCAATGTGGATCTCAGAAGACCAAATGTTAGGGGAAGACTCAAGTGGCACTGAGATTTCTAGAGAAATGGAAACCGTGGATGACAAAGTTCTCAATCACGAATACCCTAAATTTCCTTGTGATGCTTCTTCCTCTGATCTCACTCAAGGAACATGTACACCCACAGATACTTGTATAGCAGAAGATTTTCAACCACAATTTGCATGTGATGAAGCAAACAGTGCGGCTAATTCATACACAATGGGAATAGGATACCCCACAAATCTATTTCAGGATGTAGAAATACCTAGCTATGGTGGCATGCATTATCAACTCCCATATACACCTTTGGTGCTGGAAGATTTCCCACAAATAAATTTACCAGAGACAAAGTCAACGAAGCCAGAAATGACTGATGACTGCATGTTATACGACAGATACAGGGACTGTATGAATGGAACGTTAGAAGAGATCATATCTTTGTGTTGCTCTCAAGATAATTCCGTCCCTTTTTCCATGCTACAATGA 1038 0.4229 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELDIIAEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATQAGYWKATGKDRPVHTQKKPVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESVPGAALSSLKDSYSLCRIFKKTIQIPAKPKEGEQAENAKKESMWISEDQMLGEDSSGTEISREMETVDDKVLNHEYPKFPCDASSSDLTQGTCTPTDTCIAEDFQPQFACDEANSAANSYTMGIGYPTNLFQDVEIPSYGGMHYQLPYTPLVLEDFPQINLPETKSTKPEMTDDCMLYDRYRDCMNGTLEEIISLCCSQDNSVPFSMLQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5271g00004 345 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Mupr5271g00004 345 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Mupr5271g00004 345 FunFam Nac domain-containing protein 86 15 160 - -
Mupr5271g00004 345 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Mupr5271g00004 345 MobiDBLite consensus disorder prediction 165 183 - -
Mupr5271g00004 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 209 - -
Mupr5271g00004 345 MobiDBLite consensus disorder prediction 165 195 - -
Mupr5271g00004 345 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5271g00004 Mupr-Chr5271 25484 29718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5271g00004 1 330 NAC Transcription Factor Family AT1G54330 51.360 4.69e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr5271g00004 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5271g00004 - - gmx:100808325 681.404