Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5271g00001 ATGTATTATATCACCTCTAATGTCTCCATTTATAAATCAAGTGCTGCAAAAACGTCAACTAAGTGCTCAATTCTCTCGAGGGAGGAGTGTTTGAACCATAACTTAGAAATGGGTCACCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGATTATGGTCTCCTGAAGAAGATGAGAAACTTGTCAGATACATCAACACACATGGACATAAGAGGTTACAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGATTAATTATCTGAGGCCAGATCTGAAGAGGGGTTCCTTCACTGCTGAAGAAGAGCAGATCATAATTGACATTCATAGAATTCTTGGAAACAGATGGGCACAAATAGCGAAACACCTACCAGGAAGAACAGATAACGAGGTGAAGAATTTCTGGAACTCATGCATAAAAAAGAAGCTAATTTCTCAAGGGTTAGATCCACAAACCCACACTCTCCTCTCTTCTCGTAGGAGAACCTCAGCGTGTAACATTTCCAATATCCATCAAAATTCCAATTCCATTTTTATTATGAGTTCACCAAATGCACCTGTGGAAACTACTAGTCAAACCTTTTCTTCATTACCTAAACCTCCACCAAATATTGTTCAAACTCCCTCTAGCATTGTTCCCTCTAGCATTGTTTCCTCAGATTTGCCTTATGAACTATTAATGGATAACTCCTCAAACATTTGTTCACCTTCATATATGAACCCCCTCGCAGTTGAATTGTCCAACAATGAGAACAGTGTGAATTGGGTTTCAAGAGTTAATGCTGAAGATTTCAGTGCTCAAATAGTGGAAGAGGGAACACAAGTGCAGGTGCAGCAAGAGAAGGACAAGACTTGTGAGAATAAGGGAAATCTTGAAACCAGTGCTTCTTATGAGAGTTCCAACTTTGATTTTGGGTTGTTAATGGAGAGTGTACTTTCCTCCGAATTTATCTCTCATGATGTCAATTGTATGGATGACCTTTTACGATCAGGTGAACTTCAGAAAAATAATAGTAGTCTTGGGATTTAA 1026 0.3928 MYYITSNVSIYKSSAAKTSTKCSILSREECLNHNLEMGHRCCSKQKIKRGLWSPEEDEKLVRYINTHGHKRLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSRRRTSACNISNIHQNSNSIFIMSSPNAPVETTSQTFSSLPKPPPNIVQTPSSIVPSSIVSSDLPYELLMDNSSNICSPSYMNPLAVELSNNENSVNWVSRVNAEDFSAQIVEEGTQVQVQQEKDKTCENKGNLETSASYESSNFDFGLLMESVLSSEFISHDVNCMDDLLRSGELQKNNSSLGI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5271g00001 341 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Mupr5271g00001 341 Pfam Myb-like DNA-binding domain 49 87 IPR001005 -
Mupr5271g00001 341 CDD SANT 95 135 IPR001005 -
Mupr5271g00001 341 ProSiteProfiles Myb-like domain profile. 44 87 IPR001005 -
Mupr5271g00001 341 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Mupr5271g00001 341 Gene3D - 95 165 - -
Mupr5271g00001 341 SUPERFAMILY Homeodomain-like 46 134 IPR009057 -
Mupr5271g00001 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Mupr5271g00001 341 Gene3D - 46 93 - -
Mupr5271g00001 341 SMART sant 92 140 IPR001005 -
Mupr5271g00001 341 SMART sant 48 89 IPR001005 -
Mupr5271g00001 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 87 IPR017930 -
Mupr5271g00001 341 PANTHER MYB DOMAIN PROTEIN 55 37 299 - -
Mupr5271g00001 341 FunFam Transcription factor MYB86 94 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5271g00001 Mupr-Chr5271 2783 5118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5271g00001 36 326 MYB Transcription Factor Family AT3G12720 47.712 6.34e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5271g00001 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5271g00001 K09422 - gmx:100791209 465.692