Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5269g00001 ATGGAGATGGAAGGCTTGGATTCTAATTCTCAACACAACGTAGCCAAGGGGAAACGCACCAAAAGGATGAGGCTTTTGTCCCCAAATGGCGTAACTGCCACCACTACCATCGTTGCTACTACCGTTATGACGACGTCGAGCTGCTCGAGTGCTAACTCCGGCGGCTCGTCCACCACGACTTACGAGAGCGAAGAGGAAGACATGGCGAATTGCTTGATTCTGTTGGCCCAAGGAGGGGAATCGCATCTCCGTCACGACAAGCAACAAGTTGATTACCCTCTTGAAAATTGTGATGGAGTTAAGACAGAAAAGGGTAACGGAAACACTAGCAGCACAACAACCTCGGTTAATACCAAAGTTGGTTTCTATATTTATGAGTGCAAAACGTGTAACCGAACGTTCCCTTCGTTCCAAGCTCTGGGTGGACACAGGGCGAGTCACAAAAGGCCCAAACTCGTGGCGGAAGAGAAAAAACCACCACCGTCTCAATTGCCGCACCTGATTATTACCAACTACGATGGGTTCGAGGAGACTCACGTTAAAAGTGGTCCTCCGATTTCCCTTCAATTTGGGAGTAACAACAACAACAAGGGTAAGATTCACGGGTGTTCCATTTGTGGCTCTGAATTCACATCGGGGCAAGCATTGGGTGGACACATGAGGAGGCATAGGGCATCCACAAACAACCCCAACACCGTTGACACAACAAGTTCTAACACCGCCGTCACCACCACTCAACCGCCGCGCCGGAATATCTTACAATTGGATCTTAACCTCCCGGCGCCAGAAGACGACCTCCGGGAGGCTAAGTTTCAATTTACGGCGACCCAGGTTCTGCTAAACGATCTCTTTCTCACTCACACTGGCTACCACATTCCCACTCCTTTCATTAATGACAAGAATAAAGGATTTGCCATAACTGGGTTCGATAAATATGCCACTGCCATATGCATATCCGTCACCATGTCTCTGTCACCTACTATTATTTAA 990 0.4848 MEMEGLDSNSQHNVAKGKRTKRMRLLSPNGVTATTTIVATTVMTTSSCSSANSGGSSTTTYESEEEDMANCLILLAQGGESHLRHDKQQVDYPLENCDGVKTEKGNGNTSSTTTSVNTKVGFYIYECKTCNRTFPSFQALGGHRASHKRPKLVAEEKKPPPSQLPHLIITNYDGFEETHVKSGPPISLQFGSNNNNKGKIHGCSICGSEFTSGQALGGHMRRHRASTNNPNTVDTTSSNTAVTTTQPPRRNILQLDLNLPAPEDDLREAKFQFTATQVLLNDLFLTHTGYHIPTPFINDKNKGFAITGFDKYATAICISVTMSLSPTII 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5269g00001 329 ProSitePatterns Zinc finger C2H2 type domain signature. 203 223 IPR013087 -
Mupr5269g00001 329 MobiDBLite consensus disorder prediction 1 22 - -
Mupr5269g00001 329 SUPERFAMILY beta-beta-alpha zinc fingers 124 223 IPR036236 -
Mupr5269g00001 329 SMART c2h2final6 125 147 IPR013087 -
Mupr5269g00001 329 SMART c2h2final6 201 223 IPR013087 -
Mupr5269g00001 329 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 152 IPR013087 -
Mupr5269g00001 329 ProSiteProfiles Zinc finger C2H2 type domain profile. 201 228 IPR013087 -
Mupr5269g00001 329 MobiDBLite consensus disorder prediction 141 165 - -
Mupr5269g00001 329 PANTHER ZINC FINGER PROTEIN ZAT5 49 274 - -
Mupr5269g00001 329 Pfam C2H2-type zinc finger 125 150 - -
Mupr5269g00001 329 Pfam C2H2-type zinc finger 201 225 - -
Mupr5269g00001 329 ProSitePatterns Zinc finger C2H2 type domain signature. 127 147 IPR013087 -
Mupr5269g00001 329 MobiDBLite consensus disorder prediction 224 246 - -
Mupr5269g00001 329 Gene3D Classic Zinc Finger 123 223 - -
Mupr5269g00001 329 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5269g00001 Mupr-Chr5269 15139 16602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5269g00001 3 281 C2H2 Transcription Factor Family AT2G28200 41.914 2.52e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5269g00001 zf-C2H2_6 2.2e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5269g00001 - - gmx:100785286 374.015