Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5267g00002 ATGGCGGACGAAGCCAAAGCCAAAGGCAACGCAGCTTTCTCTTCCGGCGACTACGCCGCTGCCATCCGCCACTTCTCTGACGCCATCGCCTTGGCCCCCACCAACCACGTCCTATATTCGAACCGATCCGCCGCATACGCTTCGCTCCAAAACTACACCGACGCCTTAGCCGATGCCAAGAAGACCGTGGAACTCAAGCCCGACTGGTCCAAGGGCTATAGCCGTCTCGGCGCCGCTCATCTTGGGCTTTCCCAATACGACGACGCCGTTTCGGCTTACAAAAAGGGCCTCGAAATCGACCCCAACAACGAGCCCCTCAAGTCCGGCTTAGCCGATGCGCAGAAGGCCTTGGCCGCATCTTTCAGGCCCCGCTCTTCGCCCACCAACCCATTCGGCGATGCTTTCTCTGGGCCTGAGATGTGGGCCAGGCTCACCGCTGACCCTACCACTAGGGCTTACCTCCAACAGCCCGATTTCGTTAAGATGATGCAGGATATCCAGAGAGATCCCAATAACCTCAACCTCCACTTGACGGACCAGAGAGTCATGCAAGCTATTGGGGTTTTGCTCAACGTCAAGATTCAAGCCCCCCCGACGGGCGACACCGAAATGCCCGATTCGCCCTCGTCCTCGCCCTCGCCCTCCCCCTCCCCCTCCGAGAGGAAGAGAGCCGCCGAAGCCGAGCCCGCCAAGCGGCCCCAGCCCGAGCCCGAGTCCATGGAAATTCCGGAGGAGGAGAGGGTCGCGAAGCAGAGGAAGGCTGACGCTCAGAAGGAAAAGGAGGCCGGCAATGCAGCCTATAAGAAGAAGGATTTTGACACCGCAATTCAACATTACTCCAAGGCTTTGGAGTTTGATGATACGGATATATCGTATCTCACAAACCGCGCTGCTGTGTACTTGGAAATGGGAAAGTATGAGGAATGCATTGAAGATTGTGACAAGGCTGTCGAAAGAGGAAGGGAACTAAGGTCAGATTTTAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCTTTGTGAAAATGGCCAAGTGCTCGAAGGATTATGATCCTGCCATTGAGGCTTTCCAGAAAGCACTCACTGAGCACCGCAACCCTGACACATTGAAGAAACTTAATGAGGCTGAACAGGCGAAGAAAAAACTAGAACAAGAAGAATATTTTGATCCAAAGTTGGCTGATGAGGAGAGGGAAAAAGGAAACGAATTATTTAAGCAGCACAAGTATCCTGAGGCTGTGAAGCATTACTCTGAGTCTATACGAAGAAATCCTAAAGATCCTAAGGCTTATAGTAACAGAGCAGCATGCTACACTAAATTGGGAGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGCATTGAACTTGATCCAACCTTTGTAAAGGGTTATACCAGGAAAGGTGCAGTACAGTTTTTCATGAAGGAATATGACAAGGCTTTGGAAACATATAGGGAGGGGTTGAAACATGACTCTAACAACCAGGAGTTGCTTGAAGGCATTAGAACATGTATTCAACAAATTAATAAGGCTAGTCGCGGAGACTTAAGTCCTGATGAATTGAAGGAGAGACAGGCCAAGGCAATGCAGGATCCAGAAATTCAGAACATCCTCCAAGACCCTGTTATGAGACAGGTATTGATTGATTTCCAGGAAAATCCCAAGGCTGCACAGGAACACACAAAGAATCCAATGGTGATGAACAAGATCCAAAAGCTGGTCAGTGCTGGAATTGTCCAGATGAGTCTACGAGTATCAGGTGCAGAACATTTCTACATTTCATTGGCATTTTTGGCGTGA 1806 0.5017 MADEAKAKGNAAFSSGDYAAAIRHFSDAIALAPTNHVLYSNRSAAYASLQNYTDALADAKKTVELKPDWSKGYSRLGAAHLGLSQYDDAVSAYKKGLEIDPNNEPLKSGLADAQKALAASFRPRSSPTNPFGDAFSGPEMWARLTADPTTRAYLQQPDFVKMMQDIQRDPNNLNLHLTDQRVMQAIGVLLNVKIQAPPTGDTEMPDSPSSSPSPSPSPSERKRAAEAEPAKRPQPEPESMEIPEEERVAKQRKADAQKEKEAGNAAYKKKDFDTAIQHYSKALEFDDTDISYLTNRAAVYLEMGKYEECIEDCDKAVERGRELRSDFKMIARALTRKGTAFVKMAKCSKDYDPAIEAFQKALTEHRNPDTLKKLNEAEQAKKKLEQEEYFDPKLADEEREKGNELFKQHKYPEAVKHYSESIRRNPKDPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFVKGYTRKGAVQFFMKEYDKALETYREGLKHDSNNQELLEGIRTCIQQINKASRGDLSPDELKERQAKAMQDPEIQNILQDPVMRQVLIDFQENPKAAQEHTKNPMVMNKIQKLVSAGIVQMSLRVSGAEHFYISLAFLA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5267g00002 601 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Mupr5267g00002 601 Coils Coil 367 387 - -
Mupr5267g00002 601 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Mupr5267g00002 601 SUPERFAMILY TPR-like 255 383 IPR011990 GO:0005515
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Mupr5267g00002 601 FunFam Stress-induced phosphoprotein 1 1 116 - -
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 429 462 IPR019734 GO:0005515
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 395 428 IPR019734 GO:0005515
Mupr5267g00002 601 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 516 584 - -
Mupr5267g00002 601 Gene3D Tetratricopeptide repeat domain 253 389 IPR011990 GO:0005515
Mupr5267g00002 601 SUPERFAMILY TPR-like 2 114 IPR011990 GO:0005515
Mupr5267g00002 601 Pfam TPR repeat 402 443 - -
Mupr5267g00002 601 Pfam TPR repeat 263 304 - -
Mupr5267g00002 601 SMART CBM 137 176 IPR006636 -
Mupr5267g00002 601 SMART CBM 533 572 IPR006636 -
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 463 496 IPR019734 GO:0005515
Mupr5267g00002 601 MobiDBLite consensus disorder prediction 221 265 - -
Mupr5267g00002 601 Pfam STI1 domain 138 191 IPR041243 -
Mupr5267g00002 601 Pfam STI1 domain 525 576 IPR041243 -
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 256 289 IPR019734 GO:0005515
Mupr5267g00002 601 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Mupr5267g00002 601 Gene3D - 126 195 - -
Mupr5267g00002 601 MobiDBLite consensus disorder prediction 196 265 - -
Mupr5267g00002 601 FunFam Stress-induced phosphoprotein 1 253 387 - -
Mupr5267g00002 601 FunFam hsp70-Hsp90 organizing protein 3-like 394 508 - -
Mupr5267g00002 601 FunFam Putative stress-induced-phosphoprotein 1 127 195 - -
Mupr5267g00002 601 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 395 428 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 463 496 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 70 103 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 429 462 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 290 323 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 256 289 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 2 35 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 36 69 IPR019734 GO:0005515
Mupr5267g00002 601 SMART tpr_5 331 368 IPR019734 GO:0005515
Mupr5267g00002 601 PANTHER TPR REPEAT CONTAINING PROTEIN 2 556 - -
Mupr5267g00002 601 Gene3D Tetratricopeptide repeat domain 394 514 IPR011990 GO:0005515
Mupr5267g00002 601 SUPERFAMILY TPR-like 394 507 IPR011990 GO:0005515
Mupr5267g00002 601 Gene3D - 515 584 - -
Mupr5267g00002 601 Pfam Tetratricopeptide repeat 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5267g00002 Mupr-Chr5267 16605 20070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5267g00002 394 490 U-box Gene Family AT3G07370 27.835 9.94e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5267g00002 K09553 - gmx:100816776 1006.13