Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5267g00001 ATGGATACTTTTTCATGTGTTCCTCCTGGCTTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATTACTACCTTAGGAAAAAGGTAGCTTCAAAAAGGATTGATCTAGATGTAATAAAAGATGTCAATCTCTACAAAATCGAACCATGGGATCTTCAAGAATTATGCAAAATAGGAAGCGATGAACAAAATGAATGGTATTTCTTTAGTCATAAAGACAAGAAGTACCCAACTGGCACTCGTACCAATAGAGCTACAAAGGCAGGATTCTGGAAAGCTACAGGAAGAGACAAGGCAATTTACTCTAGGCATTGCCTCGTTGGCATGAGAAAGACTCTTGTCTTTTACAAAGGAAGAGCTCCAAATGGACAAAAATCTGATTGGATCATGCATGAGTACCGCCTAGAAAATAATGAAAATGGAACTCCTCAGGAAGAAGGGTGGGTTGTATGTAGAGCGTTCAAAAAACGAATGCCAATAGTGAGAAAAATGGGGGAGTATGAGTCACCCTGTTGGTATGATGACCAAGTCTCATTCATGCAAGAGCTTGAATCCCCAAGGCGAATTTCTCATCCATGTGCATCATACCCTTTCAAGAAGGAGTTGGAATTGCAATTCAATATTCCCCATGATGCGTTCCTCCAACTTCCACAACTAGAAAGTCCCAAAGTTCCTCAATCTGAAGCCACTTTGAGTTGTAGCCCACTTGTCCCTTACGGCTATTGTAGCAATAATAATGGAAATGCTTTGCAGTCCTCGCCACTCATTCAAGAAGAACACATGCAAAAACATGGCCAGCAACAAAGTCTGCAATTTCCCTTTTGTAGCATTAATGATCAAGTGGACCATGTTACGGATTGGCGAGTACTTGACAAATTTGTGGCTTCTCAGCTCAGTCACGATCAACATTTTTCCAAGGAAACCAGTTATTCCAATGTGGCTGAACAAATTAAGTTGCTAGCAAACGGATCCTCAAAACCGGAAATTGCTTCAACTTCCACCTCCTGTTGCCAGATTGACCTGTGGAAATGA 1032 0.4118 MDTFSCVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVNLYKIEPWDLQELCKIGSDEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLENNENGTPQEEGWVVCRAFKKRMPIVRKMGEYESPCWYDDQVSFMQELESPRRISHPCASYPFKKELELQFNIPHDAFLQLPQLESPKVPQSEATLSCSPLVPYGYCSNNNGNALQSSPLIQEEHMQKHGQQQSLQFPFCSINDQVDHVTDWRVLDKFVASQLSHDQHFSKETSYSNVAEQIKLLANGSSKPEIASTSTSCCQIDLWK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5267g00001 343 FunFam NAC domain-containing protein 16 160 - -
Mupr5267g00001 343 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Mupr5267g00001 343 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mupr5267g00001 343 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Mupr5267g00001 343 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 262 - -
Mupr5267g00001 343 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5267g00001 Mupr-Chr5267 591 2138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5267g00001 1 343 NAC Transcription Factor Family AT1G12260 59.003 3.53e-133 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr5267g00001 NAM 8.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5267g00001 - - gmx:100779370 582.408