Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5262g00005 ATGGCTACTCCCACATTCTGTACATACCTATTCCTTCTCTGTGTAACCCTTTCACTCTTCAATCTGAGTTCATCCTCATCAGAGGGTGACATCCTTCTCTCCTTCAAGGCTTCCATTGAAGACTCCAAGAAGGCTTTGTCCAGCTGGTCCAACACTTCATCAAGCCACCACTGTAACTGGACTGGAATCACCTGCTCCCCCTCACCTTCACTCTCAGTAACTTCTATCAACCTTCAGAGCTTAAACCTTTCTGGGGGCATCTCTTCTTCCATATGTGACCTTCCAAACCTGTCTTATCTCAACCTTGCTGATAACATTTTCAACCAGCCCATCCCTCTTCATCTCTCTCTGTGCAGTTCCTTGGAGGTTTTGAATCTCAGCACCAACCTCATATGGGGCACTCTCCCATCTCAGATTTCTCAGTTTGCTTCCTTGAGAGTGCTTGATTTGAGCAGAAACCACATAGAGGGAATCATCCCTGAAAGCTTAGGCTCCTTGAAGGACCTCATAGTCCTCAACATGGGAAGTAACTTGCTTTCAGGTACTGTACCTGCTGTCTTTGGCAATCTAACTAAACTTGAGGTGCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCAAAGGATATTGGTGAGCTTGCAAGTCTGAGGCAGCTTCTGTTGCAAAGCTCTTCTTTTCAAGGTGAAATACCAGATTCTCTGGTGGGCCTGCTTAGTTTGACCCGTTTAGATCTCTCTGAGAACAACCTAACAGGTGGGGTTCCTCAGGCTCTACCATCTTCTCTCAAGAACCTGGTATCTTTAGATGTTTCACAAAACAAGCTTTTGGGGCCATTTCCTAATGGCATCTGCAAGGGGCAAGGCCTTGTAGACCTCAGTCTACACACAAATACCTTCACTGGTTCAATACCTAACTCCATTGGTGAATGTAAGAGTCTTGAGAGATTCCAAGTCCAAAACAATGGTTTCTCTGGAGATTTCCCCATTGCATTGTGGTCTTTGCCCAAAATTAAGCTCATTAGAGCTGAAAACAACAGATTCTCAGGACTGATACCTGAGTCAATTTCAGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAACAACAGCTTTGGTGGTAAAATTCCTCAAGGTCTTGGCTTTGTCAAGAGCTTGTACAGATTTTCTGCCTCTCTCAACCGTTTCTATGGTGAACTTCCTCCAAACTTTTGTGACTCTCCTGTTATGAGCATAGTAAATCTCTCCCACAATTCTCTTTCTGGTCAAATTCCAGAGCTGAAAAAATGCAGGAAACTAGTTTCATTGTCTTTGGCTGACAACAGTCTAACAGGAGAAATGCCCCCTTCCCTTGCTGAGCTACCTGTGCTTACGTACCTTGATCTTTCAGATAACAATCTCACTGGTTCAATCCCACAAGGGCTTCAAAACCTGAAGCTTGCTCTTTTCAATGTGTCCTTTAATCAACTATCAGGTAAAGTACCATACTCCTTGATTTCTGGTCTCCCTGCTTCATTTTTGGAAGGAAACCCTGGTCTTTGTGGTCCTGGATTGCCTAACTCTTGTTCTGATGACATGCCAAGACACCACATTGGTAGCCTTACAACCTTAGCATGTGCCCTCATCTCTTTAGCCTTTGTTGCTGGAACTGCCATTGTTGTTGGTGGATTTATTCTGTATAGGAGATCTTGCAAGGGGAATCAAGTAGGGGTTTGGCGCTCAGTGTTCTTCTATCCTCTCAGAATTACTGAGCATGACCTTCTTGTAGGGATGAATGAGAAGAGCTCAATGGGAAATGGTGGGGTTTTTGGTAAAGTTTATGTTGTGAGTTTGCCTAGTGGTGAACTAGTAGCTGTGAAGAAGTTGGTTAACTTTGGAAACCAGTCCTCAAAAAGTTTGAAAGCTGAGGTCAAGACTTTGGCAAAAATTAGGCATAAGAATGTTGTTAAAATTCTGGGGTTCTGCCACTCTGATGAGTCTGTGTTTCTCATTTATGAGTACTTGCATGGAGGGAGCTTAGGGGATTTGATTTCTCATCAGAATTTTCAGTTGCAGTGGGGAGTTCGATTAAGAATTGCCATTGGAGTTGCTCAAGGACTGGCTTATCTTCACAAGGATTATGTTCCTCACTTGCTTCACAGAAATGTCAAGTCAAGTAACATTTTGTTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTCGATCGAGTTGTGGGAGAAGCTTCATTTCAATCAGTTTTGAACTCTGAAGCAGCATCTTCATGTTACATTCCACCAGAAAATGGTTACAGCAAGAAAGCAACTGAACAAATGGACATCTACAGCTTTGGTGTGGTATTGCTAGAGCTAGTGAGTGGCAGGCAAGCAGAGCAAACAGAGTCAAGTGACTCACTTGACATTGTGAAGTGGGTTAGAAGGAAAGTGAATATCACAAATGGGGTGCATCAAGTTCTTGACTCTAAAATATCACACACTTGTCACCAAGAAATGGTTGGAGCTTTAGATATTGCACTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCAATGGTAGAAGTTGTTAGAGCTCTTCAGTCCCTGGAGTCAAGAAATTGCATTGCAAATTTGCATGAACCAAATGAAGAACCCTCCATTCCAGTCTGA 2655 0.4335 MATPTFCTYLFLLCVTLSLFNLSSSSSEGDILLSFKASIEDSKKALSSWSNTSSSHHCNWTGITCSPSPSLSVTSINLQSLNLSGGISSSICDLPNLSYLNLADNIFNQPIPLHLSLCSSLEVLNLSTNLIWGTLPSQISQFASLRVLDLSRNHIEGIIPESLGSLKDLIVLNMGSNLLSGTVPAVFGNLTKLEVLDLSQNPYLVSEIPKDIGELASLRQLLLQSSSFQGEIPDSLVGLLSLTRLDLSENNLTGGVPQALPSSLKNLVSLDVSQNKLLGPFPNGICKGQGLVDLSLHTNTFTGSIPNSIGECKSLERFQVQNNGFSGDFPIALWSLPKIKLIRAENNRFSGLIPESISGAVQLEQVQLDNNSFGGKIPQGLGFVKSLYRFSASLNRFYGELPPNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGEMPPSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPGLCGPGLPNSCSDDMPRHHIGSLTTLACALISLAFVAGTAIVVGGFILYRRSCKGNQVGVWRSVFFYPLRITEHDLLVGMNEKSSMGNGGVFGKVYVVSLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISHQNFQLQWGVRLRIAIGVAQGLAYLHKDYVPHLLHRNVKSSNILLDANFEPKLTDFALDRVVGEASFQSVLNSEAASSCYIPPENGYSKKATEQMDIYSFGVVLLELVSGRQAEQTESSDSLDIVKWVRRKVNITNGVHQVLDSKISHTCHQEMVGALDIALRCTSVVPEKRPSMVEVVRALQSLESRNCIANLHEPNEEPSIPV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5262g00005 884 FunFam Leucine-rich repeat family protein 27 184 - -
Mupr5262g00005 884 SUPERFAMILY Protein kinase-like (PK-like) 601 861 IPR011009 -
Mupr5262g00005 884 Gene3D Transferase(Phosphotransferase) domain 1 669 878 - -
Mupr5262g00005 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 262 526 - -
Mupr5262g00005 884 FunFam - 587 668 - -
Mupr5262g00005 884 Pfam Protein kinase domain 594 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5262g00005 884 SUPERFAMILY L domain-like 26 287 - -
Mupr5262g00005 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Mupr5262g00005 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 863 - -
Mupr5262g00005 884 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mupr5262g00005 884 Gene3D Phosphorylase Kinase; domain 1 587 668 - -
Mupr5262g00005 884 Gene3D Ribonuclease Inhibitor 24 204 IPR032675 -
Mupr5262g00005 884 Gene3D Ribonuclease Inhibitor 205 258 IPR032675 -
Mupr5262g00005 884 SMART LRR_typ_2 142 165 IPR003591 -
Mupr5262g00005 884 SMART LRR_typ_2 166 189 IPR003591 -
Mupr5262g00005 884 SMART LRR_typ_2 264 288 IPR003591 -
Mupr5262g00005 884 SMART LRR_typ_2 190 215 IPR003591 -
Mupr5262g00005 884 SMART LRR_typ_2 239 262 IPR003591 -
Mupr5262g00005 884 SMART LRR_typ_2 455 478 IPR003591 -
Mupr5262g00005 884 Gene3D Ribonuclease Inhibitor 259 526 IPR032675 -
Mupr5262g00005 884 ProSiteProfiles Leucine-rich repeat profile. 457 480 IPR001611 GO:0005515
Mupr5262g00005 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Mupr5262g00005 884 SUPERFAMILY L domain-like 205 520 - -
Mupr5262g00005 884 ProSiteProfiles Leucine-rich repeat profile. 144 167 IPR001611 GO:0005515
Mupr5262g00005 884 Pfam Leucine Rich Repeat 458 479 IPR001611 GO:0005515
Mupr5262g00005 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5262g00005 Mupr-Chr5262 64589 67864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5262g00005 32 864 Receptor kinase-like Gene Family AT5G06940 65.394 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr5262g00005 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5262g00005 - - gmx:100794428 1556.96