Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5262g00003 ATGATGAGTGCAAGTGCAAGTGCAAGAAATAGGTCTCCTTTCACACCAACTCAGTGGCAAGAACTTGAGCAACAAGCTCTTGTTTTCAAATACATGGTTACAGGAACACCTATCCCTCCAGATCTCATCTTCTCTATTAAAAGAAGCCTAGACTCTTCAATTTCTTCAAGGCTCTTTCCACACCATCCAATTGGGTGGGGATGCTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAACAACAAGCACCGCCACAAACACCTCCCAAACAATCCCATCTTATAGCAGAAACCCCTCCTTGACCAACCCCAACATAACTTCACCCTCTTCTTTCCCTTTCTCTCCTTTGCCCTCTTCTATTCCCTCTGACTCCCAACCATTCTCCCAATCTTACCAAAACTCTTCCCTCAATCCCTTCTTCTACTCCCAATCAACCTCCTCTAGACCCCAAGATTCTGATTTTCCCCCTCAAGATGCCACCACTCACCAGCTATTCATGGATTCTGCCTCTTATTCTCATGATGACAAGGATTATAGGCATGTTCATGGAATAAGGGAGGATGTGGATGAGAGAGCCTTCTTCCCAGAAGCTTCAGGATCAGCTAGGAGCTACACTGACTCATATCAACAACTATCAATGAGCTCCTACAAGTCCTATTCAAACTCCAACTTTCAGAATATGAATGATAACAACAACCAAAGACAGCAGCAAGAGCAACCACACTGCTTTGTGTTGGGAACTGACTTCAAATCAACAAGACCAAGCAAAGAGAAAGAAGCTGAGACAACAACAACAACAAGCCAGAGACCCCTTCACCGCTTCTTTGGGGAGTGGCCACCAAAGAACACAGATTCATGGCTAGATCTTGCTTCCAACTCCAGAATCCCAACCGATGAATGA 1035 0.4512 MMSASASARNRSPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTSTATNTSQTIPSYSRNPSLTNPNITSPSSFPFSPLPSSIPSDSQPFSQSYQNSSLNPFFYSQSTSSRPQDSDFPPQDATTHQLFMDSASYSHDDKDYRHVHGIREDVDERAFFPEASGSARSYTDSYQQLSMSSYKSYSNSNFQNMNDNNNQRQQQEQPHCFVLGTDFKSTRPSKEKEAETTTTTSQRPLHRFFGEWPPKNTDSWLDLASNSRIPTDE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5262g00003 344 MobiDBLite consensus disorder prediction 119 205 - -
Mupr5262g00003 344 MobiDBLite consensus disorder prediction 105 205 - -
Mupr5262g00003 344 MobiDBLite consensus disorder prediction 292 344 - -
Mupr5262g00003 344 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr5262g00003 344 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Mupr5262g00003 344 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr5262g00003 344 MobiDBLite consensus disorder prediction 330 344 - -
Mupr5262g00003 344 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mupr5262g00003 344 PANTHER GROWTH-REGULATING FACTOR 5 12 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mupr5262g00003 344 Pfam WRC 79 121 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5262g00003 Mupr-Chr5262 40484 41891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5262g00003 1 322 GRF Transcription Factor Family AT3G13960 41.425 1.02e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mupr5262g00003 WRC 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5262g00003 - - gmx:100806024 549.28