Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5254g00004 ATGTACATGAGAAGTGGGTTCACGGATTCAAACGACGCCAGCAACAGCAGCGGCGTGTGTTGCAGTGGCGAAGCCTATTCGAGCGATTCAGATGTCGCGCCGCTGAGGCTTCTGTCGGAGAATCTAGGGTCAATATTGGAGCGAGGGGTTGACTTTTTCTCCGACGCGAAGATCGTGACCGGCGACGGCCGCGAGATCGCCGTGCACCGGTGCATTCTGGCGTCGAGGAGTTGCTTCTTCAAGGAGGCGTTCGCGGGTGGCGGCGTGCTCCGGCTGAAAGAAGTGACGAAGGAGTACGATGTTGGGTTGGAAGCGGTTGGGACAGTTCTGGCTTATTTGTACAGTGGGAGGGTGAAGCCTTTGCCCCAAGCTCGTTTTTGTGAGTGTGTGGATGATGCCTGTTCCCATTTTGGGTGTAGACCTGCTGTGGATTTCTTGCTTCAGTTGCTTTATGCTTCCTCCACCTTTCATCTTTCTCTGTTGGTTTCTCTTTTTCAGGATGAAAAAGGAGAATATAATAATTATTATCCCTCCGTGCAACGAACTGTGATGCTGAAATCTATATATAATTCATTTTGTAGACGCTTCAATGATAGTTTTGTTTACTTGCAGGAACATCTACTAGACATTCTTGACAAGGTGGCAATAGATGACATTTTGGTGGTTCTATCGGTGGCAAATATATGTGGCAAAATGTGTGATAGACTGTTAGCAACATGCACTGAGATGATAGTTAAATCTGATGTGGATATCACCACTGTTGAAAAGGCACTGCCTCAACCTGTGGTGAAACAAATCATGGACAAACGAAGAGAATTGGGCTTGTACTTAAATTTCCCTGACAAACATGTCAACAGAATACACAGGGCTCTGGATTCAGACGATCTGGAATTAGTAAGGTTGCTTTTGAAAGAGGGGCACACCACTCTTGATGATGCCTCTGCACTTCACTATGCTGTTGCATACTGTGATGTGAAGACCACCACCGAGCTTCTTGATCTTGGTCTTGCTGATGTCAACCACAAAAACCATAGGGGCTATAGTGTGCTGCATGTTGCTGCAATGAGGAAAGAGCCTAACATTATAGTTTCTCTCTTGACAAAGGGGGCACAGCCTTCTGACCCCACTTTGGATGGTAGAAAGGCCCTTCAGATTTCAAAGCGTCTCACCAAAGCTGTGGATTATTATAAGTCCACAGAGGAAGGAAAGGTGCCATGCAATGACCGATTGTGCATAGAGATATTGGAGCAAGCTGAGAAAAGGGAACCTTTACTCGGAGAGGCATCTCTTTCTCTTGCTGTGGCAGGGGATGATTTACGTACTAAATTGTTGTACCTAGAAAATAGAGTTGGACTGGCGAAATTGTTGTTTCCCATGGAAGCAAAGGTTGTTATGGACATTGCTCAAGTTGATGGCACATCTGAATTTCCATCGACAGATATCTACTGTCCAAATATTAGCGATCGTCAAAGGACAACTGTGGACTTAAACGATGCACCTTTCAGAATGAAGGAAGAGCATCTAGTTAGGTTGAGAGCACTGTCTAGAACTGTGGAGTTGGGGAAACGCTTCTTCCCTCGTTGCTCAGAAGTGTTGAATAAGATCATGGATGCTGATGACCTATCTCAGCTCACATGCATGGGTGATGACAGTCCTGATGATAGACTAAGGAAGCGAAGAAGGTATGTGGAGCTCCAAGAAGTTCTGAATAAGGTCTTCAATGAGGACAAAGAGGAGAATGATAGATCTGCCATGTCATCATCATCCTCTTCCACATCAATAGGAGTGGACATGCAACAAGACCCCACCAAACTCTTCAAAGTCCAAACCCTGTGCTCAGATCAGGAGAAA 1851 0.4581 MYMRSGFTDSNDASNSSGVCCSGEAYSSDSDVAPLRLLSENLGSILERGVDFFSDAKIVTGDGREIAVHRCILASRSCFFKEAFAGGGVLRLKEVTKEYDVGLEAVGTVLAYLYSGRVKPLPQARFCECVDDACSHFGCRPAVDFLLQLLYASSTFHLSLLVSLFQDEKGEYNNYYPSVQRTVMLKSIYNSFCRRFNDSFVYLQEHLLDILDKVAIDDILVVLSVANICGKMCDRLLATCTEMIVKSDVDITTVEKALPQPVVKQIMDKRRELGLYLNFPDKHVNRIHRALDSDDLELVRLLLKEGHTTLDDASALHYAVAYCDVKTTTELLDLGLADVNHKNHRGYSVLHVAAMRKEPNIIVSLLTKGAQPSDPTLDGRKALQISKRLTKAVDYYKSTEEGKVPCNDRLCIEILEQAEKREPLLGEASLSLAVAGDDLRTKLLYLENRVGLAKLLFPMEAKVVMDIAQVDGTSEFPSTDIYCPNISDRQRTTVDLNDAPFRMKEEHLVRLRALSRTVELGKRFFPRCSEVLNKIMDADDLSQLTCMGDDSPDDRLRKRRRYVELQEVLNKVFNEDKEENDRSAMSSSSSSTSIGVDMQQDPTKLFKVQTLCSDQEK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5254g00004 617 ProSiteProfiles BTB domain profile. 54 122 IPR000210 GO:0005515
Mupr5254g00004 617 Pfam NPR1/NIM1 like defence protein C terminal 387 592 IPR021094 -
Mupr5254g00004 617 SMART ANK_2a 282 310 IPR002110 GO:0005515
Mupr5254g00004 617 SMART ANK_2a 311 341 IPR002110 GO:0005515
Mupr5254g00004 617 SMART ANK_2a 345 374 IPR002110 GO:0005515
Mupr5254g00004 617 Gene3D - 240 474 IPR036770 -
Mupr5254g00004 617 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 260 409 - -
Mupr5254g00004 617 ProSiteProfiles Ankyrin repeat region circular profile. 345 371 - -
Mupr5254g00004 617 Pfam BTB/POZ domain 52 120 IPR000210 GO:0005515
Mupr5254g00004 617 PANTHER REGULATORY PROTEIN NPR3 5 596 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mupr5254g00004 617 MobiDBLite consensus disorder prediction 584 601 - -
Mupr5254g00004 617 SUPERFAMILY POZ domain 51 156 IPR011333 -
Mupr5254g00004 617 ProSiteProfiles Ankyrin repeat profile. 345 371 IPR002110 GO:0005515
Mupr5254g00004 617 SUPERFAMILY Ankyrin repeat 282 387 IPR036770 -
Mupr5254g00004 617 SMART BTB_4 54 154 IPR000210 GO:0005515
Mupr5254g00004 617 MobiDBLite consensus disorder prediction 574 601 - -
Mupr5254g00004 617 Pfam Ankyrin repeats (3 copies) 288 372 IPR002110 GO:0005515
Mupr5254g00004 617 Gene3D Potassium Channel Kv1.1; Chain A 26 169 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5254g00004 Mupr-Chr5254 6348 10256 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr5254g00004 NPR1_like_C 9.5e-88 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5254g00004 K14508 - gmx:100800032 894.804