Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5245g00009 ATGGTGACCGCATCCCATGTATTTAAAACTAACTACATTCCGATCCCCACACACAGAGTGAGAAAGCAAAAAGAAAATCACAATCACAAGGAAGCAAAAAGAGAAAGAGAAATAAGAAAAATGTCGTGGCAAACTTACGTAGACGAGCACTTGATGTGCGATATCGATGGCACTGGCCACCACCTCACTGCCGCAGCCATCATCGGCCTCGACGGCTCCGTCTGGGCTCAGAGCACTTCCTTCCCTCAGATCAAACCTGATGAGATCAATGGTATCCTCAAAGATTTTGACGAACCAGGCTATCTTGCTCCTACTGGCCTGCACCTTGCGGGCGCCAAATACATGGTAATCCAGGGAGAGCCAGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGCATCACCATAAAGAAAACTGGACAAGCTCTAGTTTTCGGCCTGTACGAGGAACCTGTTACTCCTGGACAATGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTTGTCGACCAGGAATATCCTCACAGAATTCTTGTTACTGCTTCAAATGCTATTCCCAATGCCTATCTTAACCGTGAACGAGCACTTCTTATCGAATACTCCACATATAACGGTTAA 618 0.4709 MVTASHVFKTNYIPIPTHRVRKQKENHNHKEAKREREIRKMSWQTYVDEHLMCDIDGTGHHLTAAAIIGLDGSVWAQSTSFPQIKPDEINGILKDFDEPGYLAPTGLHLAGAKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMVVERLGDYLVDQEYPHRILVTASNAIPNAYLNRERALLIEYSTYNG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5245g00009 205 CDD PROF 42 173 IPR005455 GO:0003779
Mupr5245g00009 205 Pfam Profilin 41 173 IPR005455 GO:0003779
Mupr5245g00009 205 Gene3D Dynein light chain 2a, cytoplasmic 39 172 - -
Mupr5245g00009 205 PRINTS Profilin signature 142 155 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Profilin signature 82 102 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Profilin signature 63 72 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Profilin signature 43 52 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Profilin signature 155 172 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Profilin signature 106 120 IPR005455 GO:0003779
Mupr5245g00009 205 FunFam Profilin 41 173 - -
Mupr5245g00009 205 SUPERFAMILY Profilin (actin-binding protein) 42 173 IPR036140 -
Mupr5245g00009 205 PANTHER PROFILIN 41 173 IPR005455 GO:0003779
Mupr5245g00009 205 SMART prof_2 41 173 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 126 141 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 159 172 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 69 82 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 113 122 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 41 54 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 94 108 IPR005455 GO:0003779
Mupr5245g00009 205 PRINTS Plant profilin signature 146 159 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5245g00009 Mupr-Chr5245 70118 72665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5245g00009 41 171 Cytoskeleton Gene Families AT4G29340 82.576 8.65e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5245g00009 K05759 - gmx:100789770 245.743