Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5245g00008 ATGAAGACCAAGACGCCATGGAAGCAGCTCAAGCTCGCGGTTCCTGCACAAGAAACCCCCATTAACTCTTTCCTGACTGCAAGTGGAACATTCCATGATGGAGATCTACTCTTGAATCAGAAAGGGTTGCGTCTTAACTATGAAGAAAAAGAATCACGGCCTTCGGATGGTAAAGAACTGGAAATTGACTTCTCGCTGGACGACCTTGAGACCATCAAAGTAATTGGAAAAGGCAGTGGTGGTGTAGTACAACTTGTTCGCCATAAGTGGGTTGGAAGATTGTTTGCTTTGAAGAATATAATTGAATGGAGTTGGAGTTCAGTTATTCAGATGAATATACAAGAGGATATTCGAAAACAGATTGTTCAGGAACTGAAAATAAATCAAGCGTCACAGTGTCCACATGTCGTAGTTTGCTATCACTCATTCTATCATAATGGAGTTATATCACTTGTGTTAGAATACATGGATCGTGGTTCTCTAGTAGATGTAATCAAACAAGTTAAAACAATTCTGGAACCATATCTTGCTGTGGTTTGTAAGCAGGTATTGCAAGGTCTTGTTTACCTGCATAATGAAAGACACGTAATACATAGGGACATTAAACCATCCAATCTGTTAGTTAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAAGCTCAATGGGCCAAAGAGACACATTTGTTGGAACTTACAATTACATGTCGCCAGAAAGAATCAGTGGGAGTACTTATGATTATAGCAGTGACATCTGGAGTTTGGGAATGGTAGTGCTTGAGTGTGCCATAGGACGGTTTCCTTATATACAGTCCGAAGATCAGCAAAGCTGGCCTAGTTTTTATGAGCTTCTGGCAGCAATTGTGGATAGCCCCCCACCTTGTGCTCCACCTGATCAGTTCTCCCCGGAGTTCTGTTCGTTCGTGTCATCCTGTTTCAACTTTCCATATCAACACAACATCCAAAAAGATCCTCAGGATAGATTAACATCCTTGGAGCTTCTGGCTCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTAGAGCTTGGGAGTTTGGTAGATCATAAATTGCAAGCTGTCAGCTTTGCACCTAACAATCTAACCATCAATTATGGATCCAAAGAAGATGAACATAGAACCTTAGACACGCTTTTCAGTCCTGTCTTTGGTTTTGTGTCTGAGTGGACGATAGGTGTACAACGTACATGGAAATCAGAAGCTATCATTTCAAGCTTTTGCGTTAAATTTGATTGA 1275 0.4078 MKTKTPWKQLKLAVPAQETPINSFLTASGTFHDGDLLLNQKGLRLNYEEKESRPSDGKELEIDFSLDDLETIKVIGKGSGGVVQLVRHKWVGRLFALKNIIEWSWSSVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLVDVIKQVKTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQSWPSFYELLAAIVDSPPPCAPPDQFSPEFCSFVSSCFNFPYQHNIQKDPQDRLTSLELLAHPFIKKFEDKDLELGSLVDHKLQAVSFAPNNLTINYGSKEDEHRTLDTLFSPVFGFVSEWTIGVQRTWKSEAIISSFCVKFD 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5245g00008 424 FunFam Mitogen-activated protein kinase kinase 6 39 157 - -
Mupr5245g00008 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mupr5245g00008 424 FunFam Mitogen-activated protein kinase kinase 6 159 365 - -
Mupr5245g00008 424 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5245g00008 424 Gene3D Transferase(Phosphotransferase) domain 1 159 372 - -
Mupr5245g00008 424 Pfam Protein kinase domain 70 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5245g00008 424 SUPERFAMILY Protein kinase-like (PK-like) 66 369 IPR011009 -
Mupr5245g00008 424 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Mupr5245g00008 424 Gene3D Phosphorylase Kinase; domain 1 38 157 - -
Mupr5245g00008 424 CDD PKc_MAPKK_plant_like 67 350 - -
Mupr5245g00008 424 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5245g00008 424 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5245g00008 Mupr-Chr5245 61904 66229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5245g00008 1 360 MAP Kinase Kinase Gene Family AT5G56580 80.332 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mupr5245g00008 Pkinase 5.5e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5245g00008 K04368 - gmx:100786284 639.802