Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5245g00002 ATGTCAAACTTGCATTACATATTAGCAGTTGTTGTTCTTGTTCTTGTGCAAAATGGCAGAATAACACATTGCCATACCAAGGGAATTAGACCAGGACGTTCTGGAGGTAAAGGGTTATCGAGCAACATGACTAGAATGCAGTATTCTGAGCAGCAATTCATGAAATGGGTGAACTTTGTTGGTAACCTCAAACACTCAGTTTTTAAGGCAGCTAAAAATAAGCTTGTGGCTTCTTACACTTTGCACGTTGATGAGAATCCTGGTGCTGGGGATTTTACCTCAATTCAAGACGCCATTGATTCCCTTCCACTCATCAATCTCGTGAGAGTGGTCATAAAAGTCCATGCAGGGGTCTACACTGAAAATGGAATTGCATCTTATTTTCCCATTCCATTTGTGTATGTGTCCAGGGAGAAAGTTAACATTCCTGCTTTGAAATCCTACATAACAATAGAAGGAGCTGGTGCAGATGAAACCATTGTTAAATGGGGTGACACTGCTCAAACCCCTGGTCCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCTGTGAATTCACCTTATTTCATTGCTAAGAATATCACATTCCAAAACACAACTCCTGTTCCTGCACCAGGAGCGGTTGGAAAGCAAGCGGTGGCATTAAGGATTTCAGCAGACACAGCAGCATTTGTAGGCTGCAAATTCTTAGGAGCACAAGACACACTTTATGATCATTTTGGCAGACATTATTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCCCTGTTTGAGGGATGTCACGTGCATGCCATAGCACAGAATACAGGGGCAGTAACAGCACAAGGAAGGAGCAGTATGTTGGAAGACACGGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCTTGGGGACCCTTTTCTCGCGTGATCTTTGCTTATACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATGACGGTATTCTATGGGCAGTACAAATGCACAGGACCTGGAGCAAGCTTTGCAGGGAGAGTATCATGGTCAAGAGAACTCACTGACGAGGAAGCTAGACCTTTTCTTTCACTTACCTTTATTGATGGGACTGAATGGGCCAAAATCTAG 1191 0.4349 MSNLHYILAVVVLVLVQNGRITHCHTKGIRPGRSGGKGLSSNMTRMQYSEQQFMKWVNFVGNLKHSVFKAAKNKLVASYTLHVDENPGAGDFTSIQDAIDSLPLINLVRVVIKVHAGVYTENGIASYFPIPFVYVSREKVNIPALKSYITIEGAGADETIVKWGDTAQTPGPNGRPLGTYGSATFAVNSPYFIAKNITFQNTTPVPAPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHFGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVIFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWSRELTDEEARPFLSLTFIDGTEWAKI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5245g00002 396 SUPERFAMILY Pectin lyase-like 76 395 IPR011050 -
Mupr5245g00002 396 Gene3D - 76 396 IPR012334 -
Mupr5245g00002 396 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 71 394 - -
Mupr5245g00002 396 FunFam Pectinesterase 77 396 - -
Mupr5245g00002 396 Pfam Pectinesterase 137 390 IPR000070 GO:0030599|GO:0042545
Mupr5245g00002 396 ProSitePatterns Pectinesterase signature 2. 253 262 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5245g00002 Mupr-Chr5245 13378 17692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5245g00002 2 393 Carbohydrate Esterase AT5G47500 41.985 6.48e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5245g00002 K01051 - gmx:100793314 704.901