Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5245g00001 ATGGGGAGAGCCACCAGGTGGGTGAAGAGTTTGTTTGGAATAAGAAAAGAGAAAGAGAAGAAACAAAACTCAAAATGTGGAGAGGCCAAAAGCATGGAATGGTGTTGTTCTGATAGTACTAGTAATTCAAGAGTTTTGTGTCACAATCCAGCAACTATACCCCCTAACATTTCTCAAGCAGAGGCTGCTTGGTTGCGATCCTTCTACACAGAGAAGGAGCAGAACAAGCACGCCATTGCAGTTGCTGCCGCTACAGCAGCAGCGGCTGATGCTGCCGTGGCGGCAGCACATGCTGCGGTGGCTGTTGTTAGGCTCACCAGCCAAGGAAGGGGTGGCACCATGTTTGGCATTGGACCTGAGATGTGGGCTGCCATCAAGATTCAGACAGTGTTTAGAGGATACCTGGCAAGGAAGGCACTGAGGGCCTTAAAAGGATTGGTGAAGTTGCAAGCACTTGTGAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCCTTCATAGTATGCAGGCTCTTATTAGAGCTCAAGCTACAATTCGGTCTCACAAATCTCGCAGGCTCATGGGCACAAAGAATGAAGCATATAGATCTCAAAACCGAGCAAGAAGATCCATGGAGAGGTTTGATGACACTAAGAGTGAGTATGCAGCTCCAATACACAGTAGAAGGGTGTCATCTTCTTTTGATGCTACAATTAACAACAACAACAACAGTGTTGATGGAAGCCCCAAAATAGTGGAAGTGGACACTGGCAGGCCTAAGTCAAGGTCTAGAAGGACAATATCAGATTTTGGTGATGAACCATCATTTCAAGCACTTTCCTCTCCCTTCCCAATTCCATATAGAACCCCTACACGTTTGTCCACACCAGACCAAAGGAATTTTCAGGACTCTGAATGGGGATTAACAGGAGAAGAGTGCAGATTCTCCACAGCACAAAGCACTCCACGCTTCACAAACTCTTGTAGTTGTGGCTCAGTTGCACCTATGACACCAAAGAGTGTGTGCACTGATAACTTGTTCCTTGGGCAATATGGGAATTTTCCAAACTACATGGCTAGTACTCAGTCCTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAAAGGCCAGAACCGGGTCCTAGGAAGAGACTTTCCCTCAACGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAAGTCTTGCTCACAGGTTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGGAAGTTTCAGAAATCCACAGAATCTGTTAGGGAGACAGACAGAAACTACTTCTACCAAAGGAGGTGG 1314 0.4619 MGRATRWVKSLFGIRKEKEKKQNSKCGEAKSMEWCCSDSTSNSRVLCHNPATIPPNISQAEAAWLRSFYTEKEQNKHAIAVAAATAAAADAAVAAAHAAVAVVRLTSQGRGGTMFGIGPEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATIRSHKSRRLMGTKNEAYRSQNRARRSMERFDDTKSEYAAPIHSRRVSSSFDATINNNNNSVDGSPKIVEVDTGRPKSRSRRTISDFGDEPSFQALSSPFPIPYRTPTRLSTPDQRNFQDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVAPMTPKSVCTDNLFLGQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPRKRLSLNEMMESRSSLSGVRMQKSCSQVQEVINFKNAVMGKFQKSTESVRETDRNYFYQRRW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5245g00001 438 ProSiteProfiles IQ motif profile. 168 197 IPR000048 GO:0005515
Mupr5245g00001 438 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Mupr5245g00001 438 Pfam Protein of unknown function (DUF4005) 315 400 IPR025064 -
Mupr5245g00001 438 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Mupr5245g00001 438 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Mupr5245g00001 438 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Mupr5245g00001 438 SMART iq_5 142 163 IPR000048 GO:0005515
Mupr5245g00001 438 SMART iq_5 119 141 IPR000048 GO:0005515
Mupr5245g00001 438 MobiDBLite consensus disorder prediction 229 293 - -
Mupr5245g00001 438 MobiDBLite consensus disorder prediction 247 263 - -
Mupr5245g00001 438 MobiDBLite consensus disorder prediction 229 243 - -
Mupr5245g00001 438 Gene3D - 63 145 - -
Mupr5245g00001 438 MobiDBLite consensus disorder prediction 276 293 - -
Mupr5245g00001 438 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5245g00001 Mupr-Chr5245 8028 9639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5245g00001 1 397 IQD Protein Family AT3G16490 51.961 7.60e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5245g00001 - - gmx:100788710 698.353