Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5239g00008 ATGGTCAACCCTAACTGCAATAATGGGTTAGTTGCAAAATTGAAGCCAGAATTTTCAGATCATGCAATAAATTACCCAGTTTTTAGTATTAGTAAGCAGAAAGTTCTTTCCATCTTGTTTCAGGCCATGGACACGTCAAATCCAGCTGTATTTGTAAATGCTCAGTTGATTCCCAATTTTATAGGGAAGAAAGTAAGAGCGGTGGTTCAGGTGAATCAATGTGATGGTGGGGTTGCCACAGCAAAATCCACTGATGACTGTCAATTAACCATAAAAGGGTTGCCACAAGTCCCTATTATGAATTATATCGAGGTCATTGGCATTGCTGAAAGTAACAACTCTATTGATGCCGAATTGTGGACTGACTTTGGCAACACATTCGGGACATCAACGAATGCTCGGTCAGCAACTGGACGGGGTATGAGTTTTGCTGATTTTGATGCTAAAGCACCTGTTCACATTTTTTCCTAG 471 0.4055 MVNPNCNNGLVAKLKPEFSDHAINYPVFSISKQKVLSILFQAMDTSNPAVFVNAQLIPNFIGKKVRAVVQVNQCDGGVATAKSTDDCQLTIKGLPQVPIMNYIEVIGIAESNNSIDAELWTDFGNTFGTSTNARSATGRGMSFADFDAKAPVHIFS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5239g00008 156 Pfam Replication factor A protein 3 43 128 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mupr5239g00008 156 SUPERFAMILY Nucleic acid-binding proteins 48 125 IPR012340 -
Mupr5239g00008 156 Gene3D - 42 149 IPR012340 -
Mupr5239g00008 156 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 39 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5239g00008 Mupr-Chr5239 65532 66763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5239g00008 43 127 Core DNA Replication Machinery Family AT4G18590 57.647 6.32e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5239g00008 K10740 - gmx:100781484 169.088