Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5224g00001 ATGTCTTCCACTCCTCACAACTCTTCTCCTGATGACTCTACACCTGATAACGAAACACCTGATAACTCTACCCCAGATGATGCTGACAACTCTTCTTCATCATCACCACCGCCACCTCCATCATCGCCACCACCATCGTCGCCGCCACCATCATCACCACCTCCGTCGTCACCGCCACCGACAGGAAAGTCACCGCCACCATCACAAAACTCCTCTCCTCCTCCTCCAACATCGAAGAACAGCCCACCATCACCCAATGCGTCCTCTCAGTCACCTCCTCCACCCGCATCAGCACGTTCTCCACCCTCTTTTGAACCACCGTCTCCCCAACACAAATCGTTGGAATCTTCATCGTCCTCATCAAAAAACTCTGACAAGGACAGTGACAGAGGTGGCACCAGTAGTCGTAGTAGCCGTGGCGGTAGCAGTCGCAGTGGCAACGACGATAGCACTAAGGTCATAGTTGGTGCAGTGCTCGGGGTAGGGAGCGTGCTTCTCATTTTGGTCATCGTTTGCGTTATCTGCTCCAGGAAGAAGAGAAAGAAAAGAATGTATTATTATGGACAACAATCTTTTGGAAAAGGGAATAATAACTATTACAACAGCGGGCAACATCAAAATTATTACGGAGGTCCACGCGGGGACCATATTGTGAGGGTACAAAACGGAATGGGTCCCGGTGGTGGTGGCGGCGGCGGGTGGGGTGCACCACCACCTCCTCCAATGATGATGAACAGTGCTGAAATGAGCTCGAATTACTCGTCGGGACCAGCCCCTCTTCCTCCACCGTCACCGAGCCTGGCTCTAGGCCTCAAAGGAGGCACCTTCTCTTATGAGGAGTTAGCTGCTGCCACAGGAGGTTTCAGTGATGTAAATTTGTTAGGACAGGGTGGCTTCGGTTATGTCCATAAGGGTGTGTTGCCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTCAAAGCAGGTAGTGGCCAAGGAGAGAGAGAGTTCCAAGCTGAGATTGAAATCATTAGTCGTGTCCATCATCGCCATCTCGTCTCTCTTGTTGGATACTCTATTTCTGGTGGTCAGAGAATGTTGGTCTATGAATTCATTTCCAATAAAACTTTGGAACATCACCTTTATGGAAGGGTAACCATGGATTGGCCTACTAGGATGCGGATTGCAATAGGATCTGCTAAAGGGCTTGCTTATCTTCATGAGGACTGTGAGAGTCATCCTCGCATAATCCATCGTGATATCAAAGCTGCGAATGTCCTTATTGATGAGAGCTTCGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCGACTCGTGTCATGGGAACTTTCGGATACTTAGCCCCTGAATATGCATCAAGTGGAAAACTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTGATGCTATTGGAACTTATAACTGGAAAGCGACCTGTGGATCACACAAATACCATGGAGGACAGCTTAGTAGATTGGGCTCGACCACTACTGAATCGTGGACTGGAGGAGGATGGCAACTTTGGAGAGTTAGTTGATCCATTTTTAGAGGGAAACTATAATCCTCAAGAACTGCCAAGGATGGCTGCTTGTGCTGCTGCCAGCATTCGTCATTCTGCCAAGAAACGTCCAAAAATGAGCCAGATTGTAAGAATTTTGGAAGGAGATGTCTCATTGGATGACTTGAAAGATGGGAAGGCAGGGATGAATAGTAATGCTTACAACTCTTCGTCTAGCTCAGATCAGTATGACACAAGGCAATATAACGCTGATTTACAAAAGTTTAGACAGGCAGTGTTTGCTAATAGCCAGGAATTTGGCACCACCAGCAGTGGCTCTAGTACTGGTGAAATGGTGAGCCAGAAGCAGCAACAACGGCTTTAG 1908 0.4769 MSSTPHNSSPDDSTPDNETPDNSTPDDADNSSSSSPPPPPSSPPPSSPPPSSPPPSSPPPTGKSPPPSQNSSPPPPTSKNSPPSPNASSQSPPPPASARSPPSFEPPSPQHKSLESSSSSSKNSDKDSDRGGTSSRSSRGGSSRSGNDDSTKVIVGAVLGVGSVLLILVIVCVICSRKKRKKRMYYYGQQSFGKGNNNYYNSGQHQNYYGGPRGDHIVRVQNGMGPGGGGGGGWGAPPPPPMMMNSAEMSSNYSSGPAPLPPPSPSLALGLKGGTFSYEELAAATGGFSDVNLLGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLVGYSISGGQRMLVYEFISNKTLEHHLYGRVTMDWPTRMRIAIGSAKGLAYLHEDCESHPRIIHRDIKAANVLIDESFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDHTNTMEDSLVDWARPLLNRGLEEDGNFGELVDPFLEGNYNPQELPRMAACAAASIRHSAKKRPKMSQIVRILEGDVSLDDLKDGKAGMNSNAYNSSSSSDQYDTRQYNADLQKFRQAVFANSQEFGTTSSGSSTGEMVSQKQQQRL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5224g00001 635 SUPERFAMILY Protein kinase-like (PK-like) 274 562 IPR011009 -
Mupr5224g00001 635 SMART serkin_6 288 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5224g00001 635 Pfam Protein kinase domain 289 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5224g00001 635 MobiDBLite consensus disorder prediction 134 150 - -
Mupr5224g00001 635 MobiDBLite consensus disorder prediction 1 31 - -
Mupr5224g00001 635 MobiDBLite consensus disorder prediction 614 635 - -
Mupr5224g00001 635 MobiDBLite consensus disorder prediction 32 108 - -
Mupr5224g00001 635 Gene3D Transferase(Phosphotransferase) domain 1 364 578 - -
Mupr5224g00001 635 Gene3D Phosphorylase Kinase; domain 1 268 363 - -
Mupr5224g00001 635 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 160 611 IPR047117 -
Mupr5224g00001 635 FunFam proline-rich receptor-like protein kinase PERK1 266 363 - -
Mupr5224g00001 635 FunFam Proline-rich receptor-like protein kinase PERK1 364 572 - -
Mupr5224g00001 635 MobiDBLite consensus disorder prediction 1 150 - -
Mupr5224g00001 635 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Mupr5224g00001 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Mupr5224g00001 635 ProSiteProfiles Protein kinase domain profile. 288 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5224g00001 Mupr-Chr5224 1708 6931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5224g00001 143 608 Trihelix Transcription Factor Family AT1G70460 49.263 1.19e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mupr5224g00001 Pkinase 7.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5224g00001 - - gmx:100777163 733.406