Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5223g00002 ACAGTAGATAGGTGTCTTAGTGATGCTAAGATTGACAAGAAGAGTGTACATGATGTTGTCCTTGTTGGTGGATCTTCCAGGATTCCCAAAGTGCAGGACCTACTAAAGGACTTGTTTAAGGGAAAGGATCTGTGCAACAGCATCAGCCCTGATGAGGCTGTTGCCTATGGTGCAACTGTGCAGGCTGCTTTGTTGACTGAAGGCGTTAAGAATGTTCCAAACTTAGTGCTATTGGATGTTACACCGCTATCCCTTGGTATATCTGTAAATATAGATAATATCATGAGAGTGGTTATTCCTAGGAATACTACCATTCCTGTAAAGAAGACACATATATACTATACACCAGAAGATAACACACGTCCTTTGTCGATATTAGGTGAGAGGACAAGAGCTATTGATAACAATTTGCTTGGTTCCTTTAGGTTTGATGGCTTTCCCCTTGCTCCTCGTGGCCATCCATTTGATGTATGTTTTGCCATAGATGAAAATGGTATCCTATCTGTTTCTGCCGAGGAAAAAACTACTGGTAATAAGAACACGATTACCATAATCAATGATAAAGGAAGAATGTCTGCAGAAGAAATTCGAAGATTGATTCAAGAAGCTGAAAAGTACCAGGCTGAAGATAGAAAGTTCTTCCGGATGGCCACTGCAAAGAATTCTTTGGATTTGTGCGTGTACAAGATGAGAAATGCTTTGAAGAAGGATATCAGCTCACAAGAAAGAGAGAATATTAATTCTGCTATTACAAAGACCACAAATTTTCTTGAAGTTGATAACCACCAGGATAAAGCAGAGGTGTTCGAGGATCATCTCAAGGACCTAGTCACCCTCTTTCAACACGTCATTGGCAAGATTGGTTACCTGGAACGGTATGGGTGCCAAGGACAAGCAAGAATAGATCTGGCAAGACCCCATTCTAAATGGTTACAAATGTAA 942 0.4055 TVDRCLSDAKIDKKSVHDVVLVGGSSRIPKVQDLLKDLFKGKDLCNSISPDEAVAYGATVQAALLTEGVKNVPNLVLLDVTPLSLGISVNIDNIMRVVIPRNTTIPVKKTHIYYTPEDNTRPLSILGERTRAIDNNLLGSFRFDGFPLAPRGHPFDVCFAIDENGILSVSAEEKTTGNKNTITIINDKGRMSAEEIRRLIQEAEKYQAEDRKFFRMATAKNSLDLCVYKMRNALKKDISSQERENINSAITKTTNFLEVDNHQDKAEVFEDHLKDLVTLFQHVIGKIGYLERYGCQGQARIDLARPHSKWLQM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5223g00002 313 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 70 220 IPR029047 -
Mupr5223g00002 313 Gene3D - 2 45 - -
Mupr5223g00002 313 PRINTS 70kDa heat shock protein signature 48 68 - -
Mupr5223g00002 313 PRINTS 70kDa heat shock protein signature 152 168 - -
Mupr5223g00002 313 PRINTS 70kDa heat shock protein signature 74 93 - -
Mupr5223g00002 313 PRINTS 70kDa heat shock protein signature 16 32 - -
Mupr5223g00002 313 SUPERFAMILY Actin-like ATPase domain 2 65 IPR043129 -
Mupr5223g00002 313 ProSitePatterns Heat shock hsp70 proteins family signature 3. 19 33 IPR018181 -
Mupr5223g00002 313 Gene3D - 221 288 IPR029048 -
Mupr5223g00002 313 Gene3D - 46 63 - -
Mupr5223g00002 313 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 219 287 IPR029048 -
Mupr5223g00002 313 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 71 224 IPR029047 -
Mupr5223g00002 313 PANTHER HEAT SHOCK PROTEIN 70KDA 2 252 IPR013126 GO:0005524|GO:0140662
Mupr5223g00002 313 Pfam Hsp70 protein 2 285 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5223g00002 Mupr-Chr5223 8636 10236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5223g00002 2 287 Calmodulin-binding Proteins AT3G12580 54.054 1.25e-96 297