LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr5197g00005	ATGGGTAGAGGACGAGAAAAACCCTCAAAGATGGAAATTGATCTCTCTTTGAAGATAGATACTGATGATGAGCAAATAGAAGAAGAAGAAGAAAAACAAGAAGCAAAGGAAGATGAGCCAGTGAAAGAGGATGACGAGGAAGAAATGGCACAGATTCCAGATAATAAGGAAGAAGTCCCTGAAGCCACAGCTGGTGAAATAGAAGATGATGCATCAGTAATTGAAACATCTTTGCAAGATAACACAAAAACAAAAGAGTTAAGTGTCTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTCCTGAGGAAAGTCGTGGAACAAACAATGAAAGATTATTATGATCTGCAAATGAAATTTTCAGCCATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTCCAAGACATTGCGACCACCAGCGATGAAGGACCATCGAGAATTCTTGAGATCTTTAACAAAAAAATCCAAAGAGATCCATCTCCTCCAAACACTGATCGTGATGAGAGTTTAAGCGAGAGTGAATTGGGTTTATCACTAAGGTTGCAACCAAGCACAAGTAAAAAAGAAAGTGACGACGTGGGAAATAAGGAAGAGAAAAAGGATCAACAATTGGCAAGTTTTGCATCGGTGCAGAACAAACTACAGCGGACACACGAGTTGCCAGGTATTACTACCCATGCTGCCTCTCCTCCAAACAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAGGCTGCCACGATGAATGATGGGTGCCAATGGAGAAAATATGGGCAGAAAATTGCAAAAGGAAATCCATGTCCACGAGCCTATTATCGTTGTACTGTAGCCCCAGGCTGCCCCGTTAGGAAACAGGTGCAAAGATGTATAGATGATATGTCGATACTTATTACAACCTATGAAGGGACACATAACCATCCACTCCCAGTGGGTGCAACTGCTATGGCTTCAACTGCTTCTGCAGCAGCTTCCTTCATGTTGCTAGACTCAAGCAACCCCATTTCAGATGGCACCTCTAGTTTCACCCAAGCACCCCTTCCTTACAGCACCTTCCACACACTAAACTCACCTTCTAATTTTAGAAGCATAAACCCCAGCGATCCATCCAAAGGGATTGTTCTTGATCTCACCAACAACCTCAGCGAACCAATACGTTTTTCTACTGGCAGCTCCTCCAACACCACAACCGATCCTCGTTTTTCTTGGATTCCAAACAAATACCACGGTGGTGCAATTGCAATGAACAATTTTCACAAGCCTCGAGGAGTGGATGTTCATGATAACAGAATTTGGAAAGGAGAAGAAAGCAAAGGAGCAGATGAGAATGTGTCCGCAATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTTGCAGCAGCCATAACATCTCTCATGAATAAAGAGAGCCACGCTACGCATACTATAGGAACTTCCTTTGCTCCTAGGAGTGGCCAAAATGGTAGCTAG	1485	0.429	MGRGREKPSKMEIDLSLKIDTDDEQIEEEEEKQEAKEDEPVKEDDEEEMAQIPDNKEEVPEATAGEIEDDASVIETSLQDNTKTKELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQMKFSAIQENNKRKDHEISLSLQDIATTSDEGPSRILEIFNKKIQRDPSPPNTDRDESLSESELGLSLRLQPSTSKKESDDVGNKEEKKDQQLASFASVQNKLQRTHELPGITTHAASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGTSSFTQAPLPYSTFHTLNSPSNFRSINPSDPSKGIVLDLTNNLSEPIRFSTGSSSNTTTDPRFSWIPNKYHGGAIAMNNFHKPRGVDVHDNRIWKGEESKGADENVSAIASDPKFRVAVAAAITSLMNKESHATHTIGTSFAPRSGQNGS	494

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	21	52	-	-
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	1	20	-	-
	Mupr5197g00005	494	SUPERFAMILY	WRKY DNA-binding domain	248	316	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	158	180	-	-
	Mupr5197g00005	494	Coils	Coil	87	114	-	-
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	192	210	-	-
	Mupr5197g00005	494	SMART	WRKY_cls	255	315	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	158	210	-	-
	Mupr5197g00005	494	Pfam	WRKY DNA -binding domain	256	314	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mupr5197g00005	494	Coils	Coil	19	39	-	-
	Mupr5197g00005	494	Gene3D	WRKY domain	240	317	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mupr5197g00005	494	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	52	474	IPR044810	GO:0003700
	Mupr5197g00005	494	MobiDBLite	consensus disorder prediction	1	80	-	-
	Mupr5197g00005	494	FunFam	probable WRKY transcription factor 31	240	317	-	-
	Mupr5197g00005	494	ProSiteProfiles	WRKY domain profile.	250	316	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr5197g00005	Mupr-Chr5197	49148	52031	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr5197g00005	42	378	WRKY Transcription Factor Family	AT1G68150	49.143	3.14e-84	263

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mupr5197g00005		WRKY	1.7e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr5197g00005	-		-	gmx:100820209	781.556