Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr518g00003 ATGTCAATTTGCAGAGGTTGTTTGCTTGTGCGCCAATCATTCTTTCACAATGATCCTAAGAATTTTGCTGACGTAGGAGGAGGTGTACTTGGATGTAGGGGTTTCCATTCCAGCTTTAGAACAACCCAAAGTGGCCTGTCTTTGAACATAGATGTCTCAACTACAATGATTATTAACCCTGGGCCTGTGGTGGATTTCCTGATTTCCAATCAAAATGTGAGAGACCCTTTTTCACTTGATTGGGCAAAGGCCAAGAGGACATTAAAAAACCTGAGGATTAAAACCAGTCCATCTAATCAAGAATTCAAAATCACTGGACTTAGTGAACTCCCTTGCAAAGACCAAATGTTTACATTGAAGGTCAAAGGTGGAAGGGATGGCGATGATGCTACTGAAGAAGTGACAGTATATGATTACTTTGTTAATCACCGAAAGATAGATCTCCGCTACTCTGGGGATCTCCCATGTATCAATGTTGGGAAGCCAAAACGTCCTACATACTTTCCTCTTGAGCTTTGCTCTTTGGTATCCCTGCAACGATATACAAAAGCCTTGTCTACACTTCAAAGGTCTTCATTGGTTGAGAAGTCCAGGCAGAAGCCACAGGAGAGGATGAGGGTCTTGTCTGATGCTCTTAAAAGTAGCAATTATGGTTCTGAGCCTATGCTTCGCAATTGTGGGATTTCTATAAGCTCTAGCTTTACTGAAGTTGAGGGTCGAGTTTTACAAGCTCCAAGGTTGAAGTTTGGTAATGGGGAGGACTTCAACCCTAGGAATGGGAGGTGGAACTTCAATAACAAGAAAATTATAAAGCCAACAAAAATAGAAAGATGGGCTGTGGTTAACTTTTCTGCACGCTGTGATGTACGAGGGCTTGTCAGAGATCTCATTAAGTGTGGGCAAATGAAAGGAATTGTTATAGATCAGCCTTTTGATGTATTTGAAGAAAGTGGTCAGTTTAGGCGTGCTCCACCAGTGGTTAGAGTGGAGAAGATGTTTGAGTTGGTTCAGTCTAAACTTCCTGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGATAGGAAAAATTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGGAATTGTTACTCAGTGTATAGCTCCAACAAGGGTCAATGACCAATATTTAACTAATGTTCTGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCAATGTTAGGTGTTGAGCATTCTCCTTCCATTCCTATTGTTTCCAGGACTCCTACCATCATTATTGGCATGGATGTCTCTCATGGCTCACCAGGGCAATCGGATATTCCGTCAATTGCAGCGGTGGTCAGCTCTCGTGAATGGCCTCTAATATCAAAGTATAGGGCTTGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGAAAGTGTCTGATAAGGAGGATGAAGGAATCATGAGGGAACTTCTTCTTGATTTCTATTCAAGTTCTGGGAGTAGAAAACCTGATAATATAATTATATTCAGGGATGGTGTTAGTGAGTCCCAGTTCAACCAAGTTTTAAATATTGAACTTGATCAAATTATTGAGGCCTGCAAGTTTCTTGATGAAAAGTGGAATCCCAAATTTTTGGTGATTGTTGCTCAAAAGAACCATCATACTAAATTCTTCCAACCTGGATCACCTGACAATGTTCCTCCTGGAACTGTGATTGATAATAAAATTTGCCATCCTAGGAATTATGATTTCTACTTATGTGCACATAATGGAATGATAGGTACTAGCAGGCCTACTCACTATCATGTTCTGTTAGATGAGATTGGCTTTTCCCCTGATGATTTACAGGAGCTTGTTCATTCTTTATCTTATGTATCAGAGGAGCACCACTGCCATTTCTGTCGAGATATGTTGTTTAATTTGTCAAAAAACCCAATCTATGCAGTTGCCCCAATATGCTATGCTCACTTGGCTGCAACTCAGATGGGACAATTTATGAAATTTGAAGATAATTCTGAGACATCTTCTGGTCATGGTGACACGCCTGCTCCTCCTGTCCCTCAGTTGCCTAAATTACAGGATAATGTCTCCAGCTCA 2097 0.4092 MSICRGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIINPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKTSPSNQEFKITGLSELPCKDQMFTLKVKGGRDGDDATEEVTVYDYFVNHRKIDLRYSGDLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLSDALKSSNYGSEPMLRNCGISISSSFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIIKPTKIERWAVVNFSARCDVRGLVRDLIKCGQMKGIVIDQPFDVFEESGQFRRAPPVVRVEKMFELVQSKLPGAPQFLLCLLPDRKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLGVEHSPSIPIVSRTPTIIIGMDVSHGSPGQSDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSDKEDEGIMRELLLDFYSSSGSRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNYDFYLCAHNGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVSEEHHCHFCRDMLFNLSKNPIYAVAPICYAHLAATQMGQFMKFEDNSETSSGHGDTPAPPVPQLPKLQDNVSSS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr518g00003 699 MobiDBLite consensus disorder prediction 670 699 - -
Mupr518g00003 699 FunFam Protein argonaute 3 414 699 - -
Mupr518g00003 699 CDD PAZ_argonaute_like 60 176 - -
Mupr518g00003 699 ProSiteProfiles Piwi domain profile. 346 667 IPR003165 GO:0003676
Mupr518g00003 699 SMART DUF1785_2 8 60 IPR014811 -
Mupr518g00003 699 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 8 669 - -
Mupr518g00003 699 Pfam Piwi domain 347 667 IPR003165 GO:0003676
Mupr518g00003 699 Gene3D - 241 407 - -
Mupr518g00003 699 SMART Piwi_a_2 346 667 IPR003165 GO:0003676
Mupr518g00003 699 Gene3D paz domain 54 181 - -
Mupr518g00003 699 SUPERFAMILY Ribonuclease H-like 330 665 IPR012337 -
Mupr518g00003 699 Gene3D - 413 699 IPR036397 GO:0003676
Mupr518g00003 699 ProSiteProfiles PAZ domain profile. 85 177 IPR003100 GO:0005515
Mupr518g00003 699 FunFam Protein argonaute 7 55 181 - -
Mupr518g00003 699 SUPERFAMILY PAZ domain 55 217 IPR036085 GO:0005515
Mupr518g00003 699 Pfam PAZ domain 64 193 IPR003100 GO:0005515
Mupr518g00003 699 Pfam Argonaute linker 1 domain 10 58 IPR014811 -
Mupr518g00003 699 CDD Piwi_ago-like 221 661 IPR045246 -
Mupr518g00003 699 Pfam Argonaute linker 2 domain 203 249 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr518g00003 Mupr-Chr518 7368 12759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr518g00003 1 696 Eukaryotic Initiation Factors Gene Family AT5G43810 35.791 3.45e-130 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr518g00003 K11593 - gmx:100779439 1286.17