Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5183g00001 ATGGGGTGTTGTCTGAGTAGTAAAGGGTCAGAGCCAGAAGAACACATTGGTCACGTGCACAATCACAACAACCATGAACCCTTTGTGAACCAATCAAAGACCCCTTTTCATCAACCTTATGGATTGCCCGAGAAACATGGTCACAGGCATGACACAATAACTGGGAAGCCCTTTGAGGATGTTAGGAAGCACTACACAATTGGGAAGGAATTGGGGAGGGGCCAATTTGGGGTGACTTATCTCTGCACAGAGAACTCAAGTGGGTTGCAATATGCGTGCAAGTCGATTTCAAAGAGGAAGCTAGTGACAAGAGCTGACAAGGAGGATATGAAGAGGGAGATTCAAATTATGCAGCATTTGAGTGGACAAGCCAACATTGTGGAGTTCAAAGGTGCTTATGAGGATAAGCATTGGGTTCATGTGGTAATGGAGCTGTGTGCAGGTGGTGAACTTTTTGACAGGATTATTGCCAAGGGACACTACAGTGAAAGAGCTGCTGCTTCAATATGTAGACAGATTGTTAAGGTTGTTCACATATGCTCTTTTATGGGTGTGATGCATAGGGATCTCAAGCCAGAGAATTTCTTGCTCTCCAGTAAGGATGACAAGGCACTTCTCAAGGCCACAGATTTTGGCTTGTCAGTCTTCATCGAACAAGGAAAGGTGTATCGAGATATAGTTGGTAGTGCTTACTATGTTGCTCCAGAAGTTCTACGTCGTAGCTATGGGAAGGAAGTAGATATATGGAGTGCAGGAGTTATATTGTATATCCTACTTAGTGGTGTACCTCCATTTTGGGCAGAGACGGAAAAGGGAATATTTGATGCCATATTGCAAGGTCATATAGATTTTGAAAGTAATCCATGGCCAAGCATATCAAGCAGTGCTAAGGACCTTGTTCGCAAGATGCTTACAAAGGATCCAAAGAAACGCATTACTCCTACTCAAGTTCTAGAGCACCCTTGGCTTAAAGAAGGTGGAAATGCTTCTGACAAGCCAATAGACAGCGCAGTTCTGTCCAGAATGAAGCAATTCAGAGCAATGAATAAGCTAAAAAAGCTAGCCCTCAAGGTCATAGCTGAAAATCTATCTGAAGAAGAGATACAAGGTTTGAAGGCAATGTTCACAAATATGGACACTGACAATAGTGGTACAATCACCTATGAGGAACTGAGGGCAGGATTGCAAAGACTTGGCTCAAAGCTTACCGAAGCCGAAGTGCGGCAGCTTATGGATGCTGCTGATGTAGATGGAAATGGCACAATTGATTACATAGAATTCATCACTGCTACAATGCATAGACACAGGTTAGAAAGAGATGAGCATCTCTACAAGGCCTTCCAATATTTTGATCAAGACGGCAGTGGGTATATCACAAGAGATGAACTTGAAACAGCCATGAAGGAATATGGTATGGGTGATGAGGCCACAATCAAAGAAATTATATCTGAAGTTGACACAGATAATGATGGTAGAATCAACTATGAAGAGTTTTGTACTATGATGAGGAGTGGAACTCAACAACAAGGCAAGCTATTTTAA 1542 0.4261 MGCCLSSKGSEPEEHIGHVHNHNNHEPFVNQSKTPFHQPYGLPEKHGHRHDTITGKPFEDVRKHYTIGKELGRGQFGVTYLCTENSSGLQYACKSISKRKLVTRADKEDMKREIQIMQHLSGQANIVEFKGAYEDKHWVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVKVVHICSFMGVMHRDLKPENFLLSSKDDKALLKATDFGLSVFIEQGKVYRDIVGSAYYVAPEVLRRSYGKEVDIWSAGVILYILLSGVPPFWAETEKGIFDAILQGHIDFESNPWPSISSSAKDLVRKMLTKDPKKRITPTQVLEHPWLKEGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDNSGTITYEELRAGLQRLGSKLTEAEVRQLMDAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDQDGSGYITRDELETAMKEYGMGDEATIKEIISEVDTDNDGRINYEEFCTMMRSGTQQQGKLF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5183g00001 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mupr5183g00001 513 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Mupr5183g00001 513 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Mupr5183g00001 513 SUPERFAMILY EF-hand 362 502 IPR011992 -
Mupr5183g00001 513 Gene3D - 331 508 - -
Mupr5183g00001 513 Gene3D Phosphorylase Kinase; domain 1 66 150 - -
Mupr5183g00001 513 FunFam calcium-dependent protein kinase 1 151 330 - -
Mupr5183g00001 513 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Mupr5183g00001 513 ProSiteProfiles Protein kinase domain profile. 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5183g00001 513 Pfam Protein kinase domain 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5183g00001 513 SUPERFAMILY Protein kinase-like (PK-like) 62 330 IPR011009 -
Mupr5183g00001 513 SMART serkin_6 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5183g00001 513 Gene3D Transferase(Phosphotransferase) domain 1 151 330 - -
Mupr5183g00001 513 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 498 - -
Mupr5183g00001 513 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Mupr5183g00001 513 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Mupr5183g00001 513 CDD EFh_PI-PLC 371 504 - -
Mupr5183g00001 513 FunFam Calcium-dependent protein kinase 1 331 506 - -
Mupr5183g00001 513 ProSiteProfiles EF-hand calcium-binding domain profile. 474 508 IPR002048 GO:0005509
Mupr5183g00001 513 SMART efh_1 442 470 IPR002048 GO:0005509
Mupr5183g00001 513 SMART efh_1 370 398 IPR002048 GO:0005509
Mupr5183g00001 513 SMART efh_1 477 505 IPR002048 GO:0005509
Mupr5183g00001 513 SMART efh_1 406 434 IPR002048 GO:0005509
Mupr5183g00001 513 CDD EFh 445 503 IPR002048 GO:0005509
Mupr5183g00001 513 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Mupr5183g00001 513 FunFam Calcium-dependent protein kinase 1 67 150 - -
Mupr5183g00001 513 CDD STKc_CAMK 64 322 - -
Mupr5183g00001 513 Pfam EF-hand domain pair 371 431 IPR002048 GO:0005509
Mupr5183g00001 513 Pfam EF-hand domain pair 441 503 IPR002048 GO:0005509
Mupr5183g00001 513 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Mupr5183g00001 513 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Mupr5183g00001 513 Coils Coil 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5183g00001 Mupr-Chr5183 2220 6651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5183g00001 41 513 EF-hand Containing Proteins AT3G20410 82.316 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr5183g00001 Pkinase 1.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5183g00001 K13412 - gmx:100794852 942.569