Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr517g00002 ATGTCAATTTGCAGAGGTTGTTTGCTTGTGTGCCAATCATTCTTTCACAATGATCCTAAGAATTTTGCCGACGTAGGAGGTATATTTGGATGTAAGGGTTTCCATTCCAGCTTTAGAACTACCCAAAGTGGCTTAGATGTCTCAGCCTGGGCGTGTGTTGGACTTCCTAATTTCCAATCAAAATGTGAGGGACCCCTTTCACTTGATTGGGTAAAGATCTCTGCCGCTCTCGAAATCTCCCATGTATCAATGTTGGGAAGCCAAAACGTCCTACATACTTTCCTCTTGAGCTTTGATCTTTGGTATCCCTGCAATGTTATACAAAAGCCTTGTCTACACTTCAAAGGTCTTCATTGGTTGAGAAGTCCAGGCAGAAGCCTTGCTCATAAAAGTAGCAATTATGATTCTGAGTCTATGCTTCGCAATTGTGGGATTTCTATAAGCTCTAGCTTTACTGAAGTTGAGGGTCGAGTTTTACAAGCTCCAAGGTTGAAATTATGTAATGGGGAGGACTTCAATAACAAGAAATATGGGTTGTGGTTAACTTTTCTGCACGCTGCAATGTACGAGGGCTTGTCAGAGATCTCATTAAGTGGCGGGCAAATGAAAGGAATTGTGATAGATCAGCCTTTTGATGTATTTGAAGAAAATGGTCAGTTTAGGCGTGCTCCACCAGTGGTTAGAGTGGAGAAGATGTTTGAGTTGGTTCAGTCTAAACGTACCGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAAAGGAAAATTTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGAAATTGTTACTCAGTGTATAGCTCCGACAAGGGTCAATGACCAATATTTAAGTAATGTTCTGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCAATGTTAGGTGTTGAGCATTCTCCTTCCATTCCTATTGTTTCCAGGACTCCTACCATCATTATTGGCATGGATGTCTCTCATGGATCGCCAGGGCAATCAGATATTCCTTCAATTGCAGCAGTGGTCAGCTCTCGTGAATGGCCTCTAATATCAAAGTATAGGGCTTGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATTGATAATTTGTTCAAGAAAGTGTCTGATAAGGAGGATGAAGGAATCATGAGGGAACTTCTGTTTGATTTCTATTCAAGTTCTGGGAATAGAAAACCCGATAATATAATTATATTCAGGAACGCTGTTATTGAGTCCCAGGTCAACCAACCATGTTTAAATTTGGCATGCAAGTTTTTCGATAAAAAGTGGAATCCCAAATTTTTGGTGATTGTTGCTCAAAAGAACCATCATACTAAATTCTTCCAACCTGGAACTCCTGACAATTTTCCTCCTGGAACTGTGATTTATAATAAAATTTGCCATCCTCGGAATTATGATTTCTACTTATGTGCACATAATGGAATGATAGGTACTAGCAGGCCTACTCACTATCATGTTCTGTTAGATGAGATTGGCTTGGCTTTTCCCCTGATGATTTACAGGAGCTTGTTCATTCTTGATCTTATGTTAAGAAACAAGTTAAATCAACTTGCTGAACAATATGAACTCTCTGAGCAGCAATTTGCACAGAAGTTGAAGCAAAAGTCATTGGAACTACAGCTTTCTGATTTAAAAATTAAGCAACATGAGGAAAAATTGATTCAGGAGCAATCACAGATAAAAGTATATGCAGAACAAGTATCTCAGTTATTAGCAACTGAGAAGAGTTTACGATTGCAGCTGACAACTGATGGAGAAAAATTCCAACAATTTCAGGATTTGCTTTGA 1821 0.3959 MSICRGCLLVCQSFFHNDPKNFADVGGIFGCKGFHSSFRTTQSGLDVSAWACVGLPNFQSKCEGPLSLDWVKISAALEISHVSMLGSQNVLHTFLLSFDLWYPCNVIQKPCLHFKGLHWLRSPGRSLAHKSSNYDSESMLRNCGISISSSFTEVEGRVLQAPRLKLCNGEDFNNKKYGLWLTFLHAAMYEGLSEISLSGGQMKGIVIDQPFDVFEENGQFRRAPPVVRVEKMFELVQSKRTGAPQFLLCLLPERKISDLYGPWKKKNLAEFEIVTQCIAPTRVNDQYLSNVLLKINAKLGGLNSMLGVEHSPSIPIVSRTPTIIIGMDVSHGSPGQSDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKKVSDKEDEGIMRELLFDFYSSSGNRKPDNIIIFRNAVIESQVNQPCLNLACKFFDKKWNPKFLVIVAQKNHHTKFFQPGTPDNFPPGTVIYNKICHPRNYDFYLCAHNGMIGTSRPTHYHVLLDEIGLAFPLMIYRSLFILDLMLRNKLNQLAEQYELSEQQFAQKLKQKSLELQLSDLKIKQHEEKLIQEQSQIKVYAEQVSQLLATEKSLRLQLTTDGEKFQQFQDLL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr517g00002 606 Pfam Argonaute linker 2 domain 129 165 IPR032472 -
Mupr517g00002 606 Pfam Argonaute linker 1 domain 12 45 IPR014811 -
Mupr517g00002 606 Gene3D - 158 307 - -
Mupr517g00002 606 Pfam Piwi domain 247 504 IPR003165 GO:0003676
Mupr517g00002 606 SMART DUF1785_2 8 55 IPR014811 -
Mupr517g00002 606 Gene3D - 314 512 IPR036397 GO:0003676
Mupr517g00002 606 SMART Piwi_a_2 246 529 IPR003165 GO:0003676
Mupr517g00002 606 Coils Coil 525 577 - -
Mupr517g00002 606 SUPERFAMILY Ribonuclease H-like 231 506 IPR012337 -
Mupr517g00002 606 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 504 - -
Mupr517g00002 606 Pfam Myosin-like coiled-coil protein 519 606 IPR026183 GO:0019905
Mupr517g00002 606 ProSiteProfiles Piwi domain profile. 246 512 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr517g00002 Mupr-Chr517 1278 8801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr517g00002 125 501 Eukaryotic Initiation Factors Gene Family AT5G43810 34.917 6.00e-59 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr517g00002 K11593 - gmx:100779439 622.468