Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5169g00002 ATGGCAACTCAAGGACAAGTCATTACCTGCAAAGCTGCGGTGGCCTGGGAACCAAACAAGCCCTTAACCGTCGAGGACGTTCAGGTGGCTCCGCCTCAGGCCGGCGAGGTCCGAATCCAAGTCCTCTACACCGCTCTCTGCCACACCGATGCTTATACGTGGGGCGGCAAGGATCCCGAAGGTCTCTTCCCCTGTATTCTCGGCCATGAAGCTGCAGGGATTGTGGAGAGTGTTGGAGAAGGTGTTACTGAAGTTCAGCCTGGGGATCATGTGATTCCCTGTTACCAGGCTGAGTGTAGGGAGTGCAAGTTTTGTAAATCGGGAAAGACCAACCTCTGTGGCAAGGTTCGCTCTGCCACTGGAGTTGGGGTCATGCTCAGCGATCGCAAAAGTCGTTTCTCCGTTAATGGAAAGCCCATATATCATTTCATGGGAACCTCCACTTTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGACCCCATTGCTCCTTTGGACAAAGTTTGTCTTCTTGGATGTGGTGTTTCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAAGTGGAGCCAGGATCAATTGTTGCTGTTTTTGGCCTTGGAACTGTTGGACTTGCTGTTGCAGAGGGTGCAAAAACTGCTGGTGCATCCAGGATTATTGGCATAGATATTGACAGCAAGAAGTTTGATATAGCAAAAAACTTTGGAGTCACTGAGTTTATAAATCCAAATGAACATGATAAACCAATTCAGCAGGTCATAGTTGATCTCACCGATGGTGGTGTTGATTATAGCTTTGAATGCATTGGAAATGTCTCCGTGATGAGAGCTGCTTTGGAATGCTGCCACAAGGGCTGGGGGACATCAGTCATTGTGGGTGTTGCAGCATCAGGGCAGGAAATATCAACTCGTCCTTTCCAGTTGGTGACTGGACGTGTCTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCAGGTCACAGGTGCCTTGGCTTGTAGACAAGTACTTGAAGAAGGTAAAGGAAATCAAGGTTGATGAGTACGTTACCCATACTTTGACTCTTTCGGAGATCAACAAGGCTTTTGATCTTTTGCATGAAGGTTTGAAACGCCAGCCTGGAGCGAATGCTCAAGAGATCAATATATCATGA 1158 0.4767 MATQGQVITCKAAVAWEPNKPLTVEDVQVAPPQAGEVRIQVLYTALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGVMLSDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLDKVCLLGCGVSTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDIAKNFGVTEFINPNEHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYLKKVKEIKVDEYVTHTLTLSEINKAFDLLHEGLKRQPGANAQEINIS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5169g00002 385 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Mupr5169g00002 385 PANTHER ALCOHOL DEHYDROGENASE 5 371 - -
Mupr5169g00002 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Mupr5169g00002 385 CDD alcohol_DH_class_III 8 370 IPR014183 GO:0006069|GO:0008270|GO:0051903
Mupr5169g00002 385 Gene3D - 13 370 - -
Mupr5169g00002 385 SUPERFAMILY GroES-like 327 370 IPR011032 -
Mupr5169g00002 385 SUPERFAMILY GroES-like 3 198 IPR011032 -
Mupr5169g00002 385 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 370 IPR014183 GO:0006069|GO:0008270|GO:0051903
Mupr5169g00002 385 FunFam S-(hydroxymethyl)glutathione dehydrogenase 13 201 - -
Mupr5169g00002 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 339 IPR036291 -
Mupr5169g00002 385 Gene3D - 182 320 - -
Mupr5169g00002 385 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
Mupr5169g00002 385 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5169g00002 Mupr-Chr5169 14343 17631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5169g00002 10 331 Monolignol Biosynthesis Gene Families AT1G72680 26.606 7.58e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5169g00002 K00121 - gmx:100499743 723.776