Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5160g00002 ATGTTAAATAATTGGGTTGTTACTATTTTTGCTTATGTGGTGCTACTCACGCTTTGTAGTTGCCTCATCGCCCGTTGCTTTCTTCCTGGCTTGAGGACTTGCTTGGAAGTAGCTAAGTACATGTTTGCTGGTGGAGAGTCAATGCCCCATGGATCCATACCAAGTTCAATCATGAACAGAAGTGAAAATATTAATGCAGAGTGCACAAGGGGGCGGAAGGAGTGGTTTGATGATGATGGAAAATTGTCTTCCATACATATTGACGTAAAACAACTTCTGAATCTGGGTTGTTTTGCTAGGACCAAGAAATGCAACCAAGATCACGGTCGCAACGGAAAAAGGGCAAACCTAGGAAGTTCAATTATTCTCGGAAGTCTGCTGGCCTCCCGCCTAGATGGAGAAGAATTGCTTATGGGCAAAACCTGTGTAATAAGCAGTATACTCCTTGTGGGTGTCACGGAATGTGTGGAAAGGAATGTCCTTGTCTTCTTCATGGAACTTGCTGTGAAAAATATTGTGGGTATGTGTTTAAAGCTCTGCAATAACCGGTTCAGAGGATGTCATTGTGCCAAGAGTCAATGCCGAAGTCGACTATGCCCATGCTTTGCAGCTAACCGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGATTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGGCGTGGAGATAGTCAATGTGGAAATATGAATCTTCTTTTAGGGCAAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAGCCTTCGCAAAGATTGATGATGCATTTCAGAACGCAGTTAACAAAAATGTTTGCCTAGGAGAGTACACGGGTGAACTAATTAATCCTAAAGAAGCAGAAAAACGTGGGAAACTATATGATCGTATAAACACTTCATTCCTTTTTAACTGGGTTATTGATGCTCGTCGTCGGGGAGACAAATTAAAATTTGCGAACCATTCATCAAAACCCAATTGTTATGCAAAGGTGATGCTTGTTGGAGGGGATCATCGAGTTGGCATATTTGCCAAGGAAAACATTAAAGCTGGTGATGAACTTTTCTACGATTACTACTATGATCTAGATACCGCACCATTATGGGCTCTTCCACCTAAAACCGAGACTTCCAAGAAAGATGAATTGACAATTTCTCAAGGCAGGACAAAGAAACACCAATCTCATTTATGA 1206 0.4237 MLNNWVVTIFAYVVLLTLCSCLIARCFLPGLRTCLEVAKYMFAGGESMPHGSIPSSIMNRSENINAECTRGRKEWFDDDGKLSSIHIDVKQLLNLGCFARTKKCNQDHGRNGKRANLGSSIILGSLLASRLDGEELLMGKTCVISSILLVGVTECVERNVLVFFMELAVKNIVGMCLKLCNNRFRGCHCAKSQCRSRLCPCFAANRECDPDVCRNCWISCGDGSLGEPPRRGDSQCGNMNLLLGQKERILLAKSDVIGWGAFAKIDDAFQNAVNKNVCLGEYTGELINPKEAEKRGKLYDRINTSFLFNWVIDARRRGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIKAGDELFYDYYYDLDTAPLWALPPKTETSKKDELTISQGRTKKHQSHL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5160g00002 401 SMART CXC_2 182 219 IPR033467 -
Mupr5160g00002 401 Gene3D SET domain 154 365 IPR046341 -
Mupr5160g00002 401 ProSiteProfiles SET domain profile. 247 364 IPR001214 GO:0005515
Mupr5160g00002 401 Pfam SET domain 305 363 IPR001214 GO:0005515
Mupr5160g00002 401 ProSiteProfiles CXC domain profile. 128 233 IPR026489 -
Mupr5160g00002 401 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 176 399 IPR045318 GO:0006338|GO:0042054
Mupr5160g00002 401 CDD SET_EZH 247 365 - -
Mupr5160g00002 401 SUPERFAMILY SET domain 174 367 IPR046341 -
Mupr5160g00002 401 SMART set_7 247 370 IPR001214 GO:0005515
Mupr5160g00002 401 Pfam CXC domain 186 217 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5160g00002 Mupr-Chr5160 5154 15665 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr5160g00002 SET 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5160g00002 - K11430 vra:106776653 432.18