Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5150g00002 ATGAAGGGAGATTGTTTGGAATTGGAGGTGGAGAAGGGAATAGGGGACGCGATTTCTAGAACCCGATTCGCCCCTTACTCTAACAACCTCCTCGTCTCTTCTTGGGACTCTTGTCTTCGCCTCTACGATGTTGACGCCTCCCAACTCAGACTCCAAGCTCCTTCCGAAGCTCCTCTTCTCGATTGCTGCTTTCAGAACGACGTCGTTGCCTTCTCTGCCTCCTCCGATGGATTTATCCAAAGGTATGACTTGCATTCAGGACTTGTTGATACAGTCGCTACTCAATTGGTCACATCCGGATTTGACAAGAAGTTATTGTTGTTGGACATGCATATGGGGAAGGCTTCTTCGTGTTCAAAAAGTCTAGATGCAGAGGTGGACTCCATGTCTGTCTCTGGGTTTAATCTTACTGTAGCTATTGGAGCATTAGTTCATGTTTATGATTTACGTAACTTTGACAAACCGGTTCAGTCAAAGGAGGCATTCAATGGAGCACACTTAAGATGTGTCAGTTCAATTCCAGATGCAGAAGGATTCGCAGTTGGGTCTGTAGATGGACGAGTAGCACTGCAGATTTCTTATTCATCCAGTTCAAATGACATTGAGTGTCATCCTAAATCAAAGGATGGACGGCATTATTTGGCATCAGTGAATGACATTGCATTCAGTCCACTTGTATCTGGTGTTTTTGTCACTGGTGACAATGAAGGTTATGTCACCATATGGGATGCTGGAAGCAAGAAAAGACTAGTTGAGTTGCCTAGGTACCCAAATAGTGTTGCATCCTTATCATACAACCACGTGGGACAGCTTCTGGCTGTAGCATCAAGCTATACTTACCAAGAAGCAAATGAAATAGAAAAACCACCTCGTATATTCATCCATAAAGTGGACAGCATTGATATTGGATCAATTTCTGCTAACGAGGAACACCACTTCGAGTCAAAGGCTGATGCTGGAGCATCAAAGACATTTCCCCAGCAAGCTGGTACTATCCGCAAAAATGGCTACATTAACATCAAGAACAGGCCATGCAAGGTTGTGGAGGTTTCAACTTCCAAAACTGGCAAGCATGGACACGCAAAGTGTCACTTTGTTGCAATTGACATCTTCACTGGCAAAAAGCTTGAGGATATTGTCCCATCTTCCCATAACTGTGATGTTCCTCATGTCAATCGCACTGACTACCAGCTCATCGATATCTCAGAGGATGGATTTGTGAGTCTGCTGACTGAGACTGGTGGTACTAAGGATGACCTTAGGCTTCCAACCGATGAAAATCTGCTTTCGCAGATCAAGGAAGGTTTTTCTGAGGGCAAAGATCTGGTTGTGTCTGTTATGTCTTCCATGGGGGAGGAGCAGATTTGTGGCCTTAAGGACATTGGCCCCAAGATAAATGTTTATTTTTAA 1410 0.4426 MKGDCLELEVEKGIGDAISRTRFAPYSNNLLVSSWDSCLRLYDVDASQLRLQAPSEAPLLDCCFQNDVVAFSASSDGFIQRYDLHSGLVDTVATQLVTSGFDKKLLLLDMHMGKASSCSKSLDAEVDSMSVSGFNLTVAIGALVHVYDLRNFDKPVQSKEAFNGAHLRCVSSIPDAEGFAVGSVDGRVALQISYSSSSNDIECHPKSKDGRHYLASVNDIAFSPLVSGVFVTGDNEGYVTIWDAGSKKRLVELPRYPNSVASLSYNHVGQLLAVASSYTYQEANEIEKPPRIFIHKVDSIDIGSISANEEHHFESKADAGASKTFPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGGTKDDLRLPTDENLLSQIKEGFSEGKDLVVSVMSSMGEEQICGLKDIGPKINVYF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5150g00002 469 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 15 277 IPR011047 -
Mupr5150g00002 469 SMART eIF_5a_2 390 459 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Mupr5150g00002 469 SMART WD40_4 4 43 IPR001680 GO:0005515
Mupr5150g00002 469 SMART WD40_4 207 243 IPR001680 GO:0005515
Mupr5150g00002 469 SMART WD40_4 45 83 IPR001680 GO:0005515
Mupr5150g00002 469 SUPERFAMILY Translation proteins SH3-like domain 320 398 IPR008991 -
Mupr5150g00002 469 FunFam Eukaryotic translation initiation factor 5A 305 390 - -
Mupr5150g00002 469 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 308 462 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mupr5150g00002 469 FunFam Eukaryotic translation initiation factor 5A 391 463 - -
Mupr5150g00002 469 Gene3D - 6 297 IPR015943 GO:0005515
Mupr5150g00002 469 Gene3D - 305 390 IPR014722 -
Mupr5150g00002 469 Gene3D - 391 464 IPR012340 -
Mupr5150g00002 469 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 355 362 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Mupr5150g00002 469 SUPERFAMILY Nucleic acid-binding proteins 391 461 IPR012340 -
Mupr5150g00002 469 NCBIfam translation initiation factor IF-5A 323 456 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Mupr5150g00002 469 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 390 459 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Mupr5150g00002 469 CDD S1_eIF5A 391 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5150g00002 Mupr-Chr5150 10430 24103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5150g00002 307 464 Eukaryotic Initiation Factors Gene Family AT1G13950 86.076 1.03e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5150g00002 K02180 - pop:7492906 638.262