Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5148g00001 ATGAGTGGAAGTAGCAAAAAGCGCTCTTCAAAGTGGGATTTGAAAGTTGAGTCTGAATTTGCACCTGATGATAGTAAGCAATTGCGGTCTGGGCGATCCTCTGCAGATGTTGCCGGTAGCAATAGTTCGAAGTGGTCTTATTTGGAAGGAAGTGATAAATTAAAGCCTGGTATGGGATTTTCATCCAAGGAACCTTTTTCTGGAGGCAGAGGTTCAAATAAGGACGATATTATGAATGAAGACTATAGAGTTTTAGATTCAACAATGGAATGGGATGAGGATGGAAGTTACAACAAGAAAATATCTCCTGGGTTCGAGGAATGGAAACATAAGAGACATAGTCAATCCCCCAAAAACGGTTGGAGCAGGAGTAGTCGAAGCAGGAGCCCCCCTCATGGTTTTAAGTGGGATTCAGGAGTCAATGACAGAAATAGAATGCGGGCTGGAGGATCAACACAACCATGTAGAGATTTTGCTGCTGGTAAATGCAGAAGAGGCAGCCATTGCCATTTTCTTCATCATGATAATCAAAATCACGAGGATAGTTGGGAAAATAAGTGCAGGGAAGATGGAGCTCCCAGATATTCTGCTCCCCACGAGAGTAGAGACTATTCTCTTAAGAGTGGTAGATCTAATGAAGCTTGCATTAATTTTGCAAAAGGCAGGTGTAGAATGGGAGCATCATGCAAGTTTGTGCATCATAATAATTCTGATGGACATGGTAAAGTTTCTGTGGATGAAGTAACTAGAGACAGGGAAATTGATAGAAGGAACAGAGATAATTCTTTTGAGCAGGGTGGTGGGCATGGGCCAAACCGTAATGGTGATACTCTTTGCAAATTTTTTGCTAATGGAAATTGTCGTAATGGTAAATTTTGTAGATTTTCTCATGATAGGCAAGCATGTAGGAGCCCCAATAGAAGATCAAGGGATGATAGGTGGGCAAGCAATCCTGGGGGAGATCATCATTTGCTGGATAGACCGAAATTGAGTGGTTCAGTTAGTCCTAATAGGAGGCCAAGGGATGATAGGTGGGGTTCAGATGGTAACAAGGCTGATGCGGATAAAGTCTGGAACAGTTCAAAGCAGAATGATACAGTTGTCTCTGATACAGCAAAGCTAGTTGAGGACAAAAGTGAAAATGTGGATGCTGCAGAGCCGGGATTTGCTCCTTTGCCTACGAGGGATGGATGGGGACACAGTTTGGATAAGAGCAGAGTGCATGGTGAACAGCCATTTTCAAGTGATAAGAAGGAAGCTGACAGTTGGATAGCAGGAAATACTGCTGCCAACATGAATGGTTCCCAGTCAATAGGTGCAGACATTTGGTTGGGTGATGCAAAAATGTCTCCTGATTGGGATTACAAGGTGGGATCTTCCAGCTGTATTAAAGAAAAGCATGAACAGAATAAGCATGGGATAAGACAGGGTGGTATGTATTTAGCATCCTCTGAACATGACAGAATACAAATTGCTCCAGGACAAGGTTTTAATCAGAATGCAGAGAGTTTGAATCCTATGCATTCTTCAAGCTGCCAAGCAATTGGACAAAGTCAAGTAGCGGTTCCCATTCTACCTTCAAAGGGAGGAATTGTTGATGGTATGCCAAACCAGGAAGTCTCTACTGAGAAAAAGTACACGGCTGAACCAAATATCATGGATGCAGGCTTATCACAAGTTAGTTCAAGAAATCCTCCTCCAACTGAGAACGTGGTAGGCAAAGAACAGCTTGCTCAGCTTACCAATCTCTCAGCCTCTCTGGCTCATATCCTTGGGACAGGGCAACAGCTGCCACAACTTTATGCTGCTTTAAATTCTCATGATGCAAAGGACACATCCTCCCTAGCAAAAACTGAGGTGCCTGCTATGCCTGTTTCCAATACATTCATCAGGCCAGATCCTGCTGCTCGACTCACGAAGCAGTATGATCCAATGTGTGACAGTCTTGAGCCCAAGAGTGCTGTTACAAGTGGGGTACCCCCAGCTGTGCCTCCAAGTAAAAAAGTTGCAGAAGATGTAGTGGAAATTCCGTTGTCCAACATGGCAAGACAAAATTTTGGTGATTCTTCCAAGGCTGCCGGCTTAGAAGAACTTGTCAAGAGTGATCCTCTAATCCAGTTGCAGCCAGGTCAAAACACTAGGGCTAATAAGGATAGTAACAAGGAAGTGTTACCTGACGAAAGGCTAAAATCTCAAGATGATTCTAAAAGTACCAAAGAGAATGGTCCTTTGGAGAACATGGACCAAACTGGTGGTCCTGATGAGGCCAAGAAACCAAAGGATATGAAGGGGAGTCGTGCATTTAAATTTGCATTGGTTGAGTTTGTTAAGGAGCTTCTGAAACCAACATGGAAAGAAGGTCAAATCACCAAAGAAGATTATAAAACAATTGTGAAGAAAGTTGTTGATAAAGTAACTGGTTCCATGCAGGGGGCCAGTATTCCTCAGACACAAGAGAAAATTGACCACTATTTATCATTTTCAAAACCAAAGCTTAACAAACTTGTACAGGCGTATGTGGAAAAGGTTCAGAAGGCTTAG 2541 0.4298 MSGSSKKRSSKWDLKVESEFAPDDSKQLRSGRSSADVAGSNSSKWSYLEGSDKLKPGMGFSSKEPFSGGRGSNKDDIMNEDYRVLDSTMEWDEDGSYNKKISPGFEEWKHKRHSQSPKNGWSRSSRSRSPPHGFKWDSGVNDRNRMRAGGSTQPCRDFAAGKCRRGSHCHFLHHDNQNHEDSWENKCREDGAPRYSAPHESRDYSLKSGRSNEACINFAKGRCRMGASCKFVHHNNSDGHGKVSVDEVTRDREIDRRNRDNSFEQGGGHGPNRNGDTLCKFFANGNCRNGKFCRFSHDRQACRSPNRRSRDDRWASNPGGDHHLLDRPKLSGSVSPNRRPRDDRWGSDGNKADADKVWNSSKQNDTVVSDTAKLVEDKSENVDAAEPGFAPLPTRDGWGHSLDKSRVHGEQPFSSDKKEADSWIAGNTAANMNGSQSIGADIWLGDAKMSPDWDYKVGSSSCIKEKHEQNKHGIRQGGMYLASSEHDRIQIAPGQGFNQNAESLNPMHSSSCQAIGQSQVAVPILPSKGGIVDGMPNQEVSTEKKYTAEPNIMDAGLSQVSSRNPPPTENVVGKEQLAQLTNLSASLAHILGTGQQLPQLYAALNSHDAKDTSSLAKTEVPAMPVSNTFIRPDPAARLTKQYDPMCDSLEPKSAVTSGVPPAVPPSKKVAEDVVEIPLSNMARQNFGDSSKAAGLEELVKSDPLIQLQPGQNTRANKDSNKEVLPDERLKSQDDSKSTKENGPLENMDQTGGPDEAKKPKDMKGSRAFKFALVEFVKELLKPTWKEGQITKEDYKTIVKKVVDKVTGSMQGASIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKA 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 93 114 - -
Mupr5148g00001 846 Pfam RNA-binding, Nab2-type zinc finger 214 233 - -
Mupr5148g00001 846 SUPERFAMILY CCCH zinc finger 275 298 IPR036855 GO:0046872
Mupr5148g00001 846 Gene3D - 269 323 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 93 153 - -
Mupr5148g00001 846 ProSiteProfiles Zinc finger C3H1-type profile. 149 176 IPR000571 GO:0046872
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 1 78 - -
Mupr5148g00001 846 Pfam CCCH-type zinc finger 278 298 IPR041367 -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 31 48 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 302 420 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 702 762 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 240 274 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 354 370 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 336 351 - -
Mupr5148g00001 846 SMART c3hfinal6 273 299 IPR000571 GO:0046872
Mupr5148g00001 846 SMART c3hfinal6 149 175 IPR000571 GO:0046872
Mupr5148g00001 846 SMART c3hfinal6 210 235 IPR000571 GO:0046872
Mupr5148g00001 846 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 152 174 IPR000571 GO:0046872
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 399 417 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 240 263 - -
Mupr5148g00001 846 ProSiteProfiles Zinc finger C3H1-type profile. 273 300 IPR000571 GO:0046872
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 719 741 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 8 30 - -
Mupr5148g00001 846 ProSiteProfiles Zinc finger C3H1-type profile. 209 236 IPR000571 GO:0046872
Mupr5148g00001 846 Gene3D - 145 247 - -
Mupr5148g00001 846 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 845 - -
Mupr5148g00001 846 MobiDBLite consensus disorder prediction 302 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5148g00001 Mupr-Chr5148 1096 5405 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr5148g00001 zf-CCCH 0.00012 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5148g00001 - K22909 gmx:100783856 1447.95