Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5131g00006 ATGCCAAACAGCATCGAATCCCTTCATCTTTCACTTCGCAACCTCTCCCAACTCAGCACCAGAATGGATTCACTTCAAACCTTCGTTTCCCAATCCATCCAATCCCACACTCTCCTCTCCCACCGCCAAATGACCCTAGTCTCCAACGAGATCCTAACCGCCATTCGCCACGTCATCACCAACGGCGCCGCCCTCGTCGCCGCCTCGGAAAACGTTCTCCCCCCTCCGGACACCGACGACGACGACGCCCTCCTGGTGGAGCTCGACGCGGTGGAGCTGCTTGCCAAGCACCTTCACTTCTGCGAGGTGTGCGGGAAAGGCTTCACGCGCGACGCCAACCTGCGGATGCACATGCGCGCGCACGGGGACGAGTTCAAAACCCCGGAGGCGCTAGCGAACAGGGCGCGTGGGGAAACCACGCGCCCCAAAGCGACGCGGTTTTCGTGCCCCTTCGAAGGCTGCAACCGGAACAAGACGCACAAGAGGTTCAGACCCTTGAAGTCCGTGTTTTGCCTGAGGAACCACTTCAAGAGGAGCCACTGCCCTAAAACGCTGTCGTGCGAGCGGTGTCGGAAGAAGAGCTTCGCGGTACTATCGGACTTGAGGAGCCACGTGAAGCAGTGTCGGGGAGAGGCCACGTGGAAGTGCTCGTGCGGGACCACGTTTTCGAGGAAGGACAAGTTGTTGGGACACGTGGCGTTGTTCGAGGGGCATTTGCCGGCGCTTGAAGAGGAGAGAGAGACTCCAATGGCGGCGGAAGGGTTGGTGAAGAACAGTGATGGGGCTTTGGATGGGTTGCCTGAAGGGTTCTTTGATGGTTTGGATGATTTTGGGTTTGGTTCCAATTAA 849 0.583 MPNSIESLHLSLRNLSQLSTRMDSLQTFVSQSIQSHTLLSHRQMTLVSNEILTAIRHVITNGAALVAASENVLPPPDTDDDDALLVELDAVELLAKHLHFCEVCGKGFTRDANLRMHMRAHGDEFKTPEALANRARGETTRPKATRFSCPFEGCNRNKTHKRFRPLKSVFCLRNHFKRSHCPKTLSCERCRKKSFAVLSDLRSHVKQCRGEATWKCSCGTTFSRKDKLLGHVALFEGHLPALEEERETPMAAEGLVKNSDGALDGLPEGFFDGLDDFGFGSN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5131g00006 282 SMART c2h2final6 99 121 IPR013087 -
Mupr5131g00006 282 SMART c2h2final6 147 180 IPR013087 -
Mupr5131g00006 282 SMART c2h2final6 185 206 IPR013087 -
Mupr5131g00006 282 Pfam Zinc-finger of C2H2 type 100 119 - -
Mupr5131g00006 282 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Mupr5131g00006 282 FunFam B-cell CLL/lymphoma 6, member B 98 121 - -
Mupr5131g00006 282 SUPERFAMILY beta-beta-alpha zinc fingers 96 124 IPR036236 -
Mupr5131g00006 282 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 80 248 IPR044300 GO:0010044|GO:0010447
Mupr5131g00006 282 Gene3D Classic Zinc Finger 92 151 - -
Mupr5131g00006 282 Gene3D Classic Zinc Finger 182 239 - -
Mupr5131g00006 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5131g00006 Mupr-Chr5131 39236 40084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5131g00006 66 259 C2H2 Transcription Factor Family AT1G34370 52.284 3.57e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr5131g00006 zf-met 0.0011 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5131g00006 - - vum:124823301 432.95