Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5124g00001 ATGGCTGAACCCTATGAGACTAGGGTGAAGTACTCAAGGGAACCTGATAATCCCACCAAGTCTTGCAAGGCTAGAGGCGCAGACCTTAGGAACACTCGGGAAACTGCGTTTGCAATCAGGAAGTTGCCCTTGACTAAGGCTAAAAGGTACTTGGAAGATGTTCTTGCTCACAAGCAGGCCATTCCATTCAGACGTTTCTGTCGTGGTGTTGGAAGGACAGCCCAAGCAAAGAATAGACACTCTAATGGCCAAGGACGGTGGCCTGTCAAATCAGCTAAATTCATCCTTGATTTGCTTAAGAATGCTGAGAGCAATGCCGAAGTGAAAGGTTTGGATGTTGATGCGCTGTACGTTTCTCACATTCAAGTCAATCAAGCACAGAAGCAAAGACGCCGAACATACCGAGCCCATGGAAGAATCAATCCTTATATGTCATCTCCCTGCCACATAGAGTTGATATTATCTGAAAAGGAAGAGCCTGTCAAGAAGGAGCCCGAGACGAAGTTGGCAACAAGCAAGAAGTCCCAAGCGCTTTGA 537 0.4693 MAEPYETRVKYSREPDNPTKSCKARGADLRNTRETAFAIRKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLATSKKSQAL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5124g00001 178 CDD Ribosomal_L22 22 154 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mupr5124g00001 178 ProSitePatterns Ribosomal protein L22 signature. 130 154 IPR018260 GO:0003735|GO:0005840|GO:0006412
Mupr5124g00001 178 FunFam 60S ribosomal protein L17 8 178 - -
Mupr5124g00001 178 Gene3D Ribosomal protein L22/L17 8 178 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mupr5124g00001 178 PANTHER 60S RIBOSOMAL PROTEIN L17 9 176 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mupr5124g00001 178 Pfam Ribosomal protein L22p/L17e 29 155 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mupr5124g00001 178 NCBIfam 50S ribosomal protein L22 11 157 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mupr5124g00001 178 SUPERFAMILY Ribosomal protein L22 9 157 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mupr5124g00001 178 MobiDBLite consensus disorder prediction 157 178 - -
Mupr5124g00001 178 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5124g00001 Mupr-Chr5124 8449 12052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5124g00001 9 177 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 86.705 1.10e-110 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5124g00001 K02880 - gmx:100499784 327.791