Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5123g00002 ATGGCACTACATAATGCAGCAAGCAGAACAATAATTTGTGAGCATTCCTCACTTACCTCAAAGTCCAACATGCTGTCCATAAAGCTTATATTATTTTGGTTGATTCTCATCACGTTCTTCTGTTCATTTTTAAGGCTCTCTTCCTTGGATGTTTCTAGCTATGAAGCTTCAGAAGATGAAGACATTAAAGCAAGTGCTCTATTAAAGTGGAAAGCCAGCCTTGATAACCAAAGCCAGGCTTCCTTGTCTTCTTGGTCCACCTTTACTAGCCCTTGCAAGTGGCAAGGAATTGTTTGTGATGAATCCAACTCAGTCAGCAGTATAAATGTTACAAATTTTGGACTAAAAGGTACACTTCTCAATCTCAACTTGTCATCCTTTCCTAAGCTGCTGAGTCTTGATGTAAGTAGCAACTCCTTCAGTGGACCTATTCCCCACCAAATTGGTAACCTGTCCAGAATTTCTCAGTTGAAAATGCATCATAATCTTTTTAGTGGTTACATCCCCCAAGAAATAGGGGCACTGCATAACTTGAAGTGTCTGGACTTGAGAGTAAATAGACTTTCTGGTTCCATCCCCCCAACAGTTGGAATGTTGACTAGTCTTGTTATACTTGATTTGTCATCCAACAATCTCTCTGGTGCAATCCCTTCATTTGGAAACTTGACAAATTTAGCACAACTTCTCCTCTTTAACAACCTTCTCTCTGGCCTTATTCCTGAGGAGTTGGGAACACTTCATTCTCTCACAACAATCATATTGGTAAAAAATAATTTTTCTGGGCCAATCCCATCTTCCATAGGAAACTTGGCTAGTTTGACAACGCTTCAGCTCAGTTTTAATAAACTTGATGAATCAATTCCTTCCACTCTTGGAAACTTGACAAAACTCACTGAATTGTCCATGCGCCATAACAAGCTTTCTGGATCAATTCCTGCTTCCATAGGAAACTTGGTCAATCTGAAGAAGCTTAGCCTTTCAGAAAACAATCTTTCTGGACCTATTCCCTCTACCTTCAGAAATTTGACAAAGCTCACCTTCCTAGTACTTTATCAGAACAACCTTAATGGTAGTTTTTCAGCAGCAGTAAGTAACCTTACCAACTTAGTAAGCTTACAACTAAGCTTGAATCATTTCACTGGCCTTTTGCCACAACATATTTGCCTTGGAGGATCACTCTTACATTTTTCTGCCAATAAGAATCATTTCACAGGTCCAATTCCAACAAGTTTGAAGAACTGCTCCAGCCTTGTTAGGCTCAACCTTGTAGAAAATATGTTGACTGGAAATATTTCAAATGATTTTGGTGTATATCCAAATTTGAACTACATTGATCTGAGTAGCAATGACTTATATGGCCACCTTTCATCAAATTGGGCCAAAAGCCATAATCTCATAGGTCTAATGATCTCAGACAACAATTTATCCGGTGCTATACCGCCAGAACTCGGCCAGGCACCCAAGTTACAACTACTTCATTTATCTTCAAATCATCTAACAGGAAAAATTCCAAAACAACTTGGGAACTTGACCTCATTGTTTGATCTATCCATAAGCAACAATGAACTTTCTGGCAACATTCCTGCAGAAATAGGATTCCTAAAGCAGCTCCAGTACTTGGATCTTGCAACAAATGGTTTAAGTGGTTCAATCCCAACACAGGTCGGAGGGTTGCACAAGGTAATTCACTTGAACTTAAGCCATAACAAATTCATGGAAAGCATTCCCTCTGAATTTAGCCAATTGCAATTTCTTCAAGCTCTTGATCTCAGTGAGAATTTGATAAATGGAAAAATTCCAGAAGCACTTGCAAGCATGCAAATATTGGAAACGCTAAACCTCTCACACAACAATCTCTCTGGAACCATTCCATCTAGTTTTAAGGATATGATTAGCTTGACAAATGTTGACATATCTAACAACCAATTGGAGGGTTCAATTCCTAACAGTCCAGCCTTTCTTAAGGCTCCATTTGATGCATTCAAAAATAATAAAGGCTTGTGTGGAAATGCCTCCGGTTTGATGCCTTGCCAAGATCCAAATGGTAAAAAGAGAAATGTCATGATGTTGGCATTATTCCTTATCTTGGGTGCACTGTTGCTAATGGTGTTTGTGATTGGAGTTTCATTATATATCCATTGGCAAAGAACAAGAAAAATAAAAAAGCGCGCAAGAGAAGAACAAACTCAGGATCATTATTCCGTATGGAGTTATGATGGAAAAATAGTGTATGAAGATATCATTGAAGCCACAGAGGGTTTTGATGACAAATATCTCATTGGAGAAGGAGGATCTGCATCTGTTTATAAGGCAAAGTTACCCACAGGACAGATTGTTGCTGTGAAAAAACTTCATGCTGCACCCAACGAGGAAACACTCGATTTAAGAGCTTTTACAAGTGAGGTTCAAGCCTTGGCAGAAATCAAGCATCGTAACATCGTGAAGTTATTTGGATATTGTTTACATCCACGTTTCTCCTTTTTGGTTTATGAGTTCCTAGAGGGGGGTAGCTTGGATAAAGTACTAAACAATGACACGCATGCAACAATGTTTGATTGGAATAAAAGGGTGAAGGTTGTTAAAGGTGTGGCAAATGCTTTGTACCATATGCATCATGGTTGCTTTCCTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTATAGATTTGGATTATGAAGCCCGCATCTCTGACTTTGGAACAGCTAAAATTCTGAATCCTGATTCACACAATTTTACTTCTTTTGAAGGCACTTATGGATATGCTGCCCCAGAGCTTGCTTATACTATGGAAGTGAATGAGAAATGTGATGTGTTTAGTTATGGAGTGCTTTGTTTGGAAATAATAATGGGAAAGCATCCAGGAGATCTCATCTCTTCAATGTATTCAACCTCTTCCACATCTAATTTGCTATTGAAGGATGTGCTGGACCAACGACTTCCTCTTCCAATGATGCCAGTTGTTAAGGAAGTGATCTTCATTGCAAAAGTGGCATTTGCTTGTTTGAATGAAAGACCACTTTCTCGCCCAACCATGGAAGACGTGTACAACATATTTGTGATGCCAAAATCACCTTTAATGAAGGAGACTATCCACACCGTTGCACTTGGACAACTTCAAAATTGTTGA 3135 0.3895 MALHNAASRTIICEHSSLTSKSNMLSIKLILFWLILITFFCSFLRLSSLDVSSYEASEDEDIKASALLKWKASLDNQSQASLSSWSTFTSPCKWQGIVCDESNSVSSINVTNFGLKGTLLNLNLSSFPKLLSLDVSSNSFSGPIPHQIGNLSRISQLKMHHNLFSGYIPQEIGALHNLKCLDLRVNRLSGSIPPTVGMLTSLVILDLSSNNLSGAIPSFGNLTNLAQLLLFNNLLSGLIPEELGTLHSLTTIILVKNNFSGPIPSSIGNLASLTTLQLSFNKLDESIPSTLGNLTKLTELSMRHNKLSGSIPASIGNLVNLKKLSLSENNLSGPIPSTFRNLTKLTFLVLYQNNLNGSFSAAVSNLTNLVSLQLSLNHFTGLLPQHICLGGSLLHFSANKNHFTGPIPTSLKNCSSLVRLNLVENMLTGNISNDFGVYPNLNYIDLSSNDLYGHLSSNWAKSHNLIGLMISDNNLSGAIPPELGQAPKLQLLHLSSNHLTGKIPKQLGNLTSLFDLSISNNELSGNIPAEIGFLKQLQYLDLATNGLSGSIPTQVGGLHKVIHLNLSHNKFMESIPSEFSQLQFLQALDLSENLINGKIPEALASMQILETLNLSHNNLSGTIPSSFKDMISLTNVDISNNQLEGSIPNSPAFLKAPFDAFKNNKGLCGNASGLMPCQDPNGKKRNVMMLALFLILGALLLMVFVIGVSLYIHWQRTRKIKKRAREEQTQDHYSVWSYDGKIVYEDIIEATEGFDDKYLIGEGGSASVYKAKLPTGQIVAVKKLHAAPNEETLDLRAFTSEVQALAEIKHRNIVKLFGYCLHPRFSFLVYEFLEGGSLDKVLNNDTHATMFDWNKRVKVVKGVANALYHMHHGCFPPIVHRDISSKNVLIDLDYEARISDFGTAKILNPDSHNFTSFEGTYGYAAPELAYTMEVNEKCDVFSYGVLCLEIIMGKHPGDLISSMYSTSSTSNLLLKDVLDQRLPLPMMPVVKEVIFIAKVAFACLNERPLSRPTMEDVYNIFVMPKSPLMKETIHTVALGQLQNC 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5123g00002 1044 ProSitePatterns Protein kinases ATP-binding region signature. 760 783 IPR017441 GO:0005524
Mupr5123g00002 1044 FunFam Leucine-rich repeat receptor protein kinase MSP1 716 832 - -
Mupr5123g00002 1044 FunFam MDIS1-interacting receptor like kinase 2 833 1027 - -
Mupr5123g00002 1044 SMART LRR_sd22_2 294 320 - -
Mupr5123g00002 1044 SMART LRR_sd22_2 534 560 - -
Mupr5123g00002 1044 SMART LRR_sd22_2 199 224 - -
Mupr5123g00002 1044 SMART LRR_sd22_2 342 368 - -
Mupr5123g00002 1044 Gene3D Phosphorylase Kinase; domain 1 714 832 - -
Mupr5123g00002 1044 SUPERFAMILY Protein kinase-like (PK-like) 733 1020 IPR011009 -
Mupr5123g00002 1044 Pfam Leucine rich repeat N-terminal domain 64 100 IPR013210 -
Mupr5123g00002 1044 ProSiteProfiles Leucine-rich repeat profile. 201 223 IPR001611 GO:0005515
Mupr5123g00002 1044 PANTHER LEUCINE RICH REPEAT KINASE 2 290 1027 - -
Mupr5123g00002 1044 SUPERFAMILY L domain-like 72 427 - -
Mupr5123g00002 1044 Gene3D Ribonuclease Inhibitor 61 173 IPR032675 -
Mupr5123g00002 1044 ProSitePatterns Tyrosine protein kinases specific active-site signature. 878 890 IPR008266 GO:0004672|GO:0006468
Mupr5123g00002 1044 ProSiteProfiles Protein kinase domain profile. 754 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5123g00002 1044 Gene3D Transferase(Phosphotransferase) domain 1 833 1029 - -
Mupr5123g00002 1044 Gene3D Ribonuclease Inhibitor 174 249 IPR032675 -
Mupr5123g00002 1044 SUPERFAMILY RNI-like 331 649 - -
Mupr5123g00002 1044 FunFam Leucine-rich repeat receptor protein kinase EMS1 263 362 - -
Mupr5123g00002 1044 Pfam Leucine rich repeat 487 547 IPR001611 GO:0005515
Mupr5123g00002 1044 Pfam Leucine rich repeat 585 643 IPR001611 GO:0005515
Mupr5123g00002 1044 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
Mupr5123g00002 1044 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Mupr5123g00002 1044 FunFam Nuclear pore complex protein NUP107 60 218 - -
Mupr5123g00002 1044 Pfam Protein kinase domain 756 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr5123g00002 1044 Gene3D Ribonuclease Inhibitor 250 391 IPR032675 -
Mupr5123g00002 1044 Gene3D Ribonuclease Inhibitor 392 680 IPR032675 -
Mupr5123g00002 1044 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 366 681 - -
Mupr5123g00002 1044 SMART LRR_typ_2 606 629 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 175 198 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 270 294 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 487 510 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 582 605 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 534 557 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 318 341 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 558 581 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 199 221 IPR003591 -
Mupr5123g00002 1044 SMART LRR_typ_2 366 390 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5123g00002 Mupr-Chr5123 18055 21612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5123g00002 17 926 Receptor kinase-like Gene Family AT4G08850 44.340 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr5123g00002 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5123g00002 - - gmx:100800924 1487.63