Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5116g00002 ATGGGAGTGACCAAGCAATTTGTTACCCTTTCGACACGATTTCAAGAGGCAATGAGGATGGTCTTGGACATTGTGGAAAGAGGTAGAAAGAACAAAAGGAACAAACGAATTCTTAAGTCAATTCTCAAGGATATGACTCCTTTGGTGCAGGAAATCAAGCAATACAACGAACACTTGAACCCACCCAGAGAAGAAATTAACATTCTTATCAAAGAAAAAGATGCAGGGGAGGCGCTTGCGTGCTATTCCTGCTCCAGGAATATTTGGTGGTCCAAATTCCTCTCTTGGCTTCCACTCTATGGGGACGGACTTTGGCATAATAGGAGTGATTCCCTTGCTGCCGCTGACAAGCAAGTTAAGGATATAAAGAACACACTGTACAAGGTGAGAGAGATTCTTGAGCTTCTTGACATAGAGAATTTTGAGCAGAAACTTAAAGGTGTTGGAACACCAATCAAGTGTCCTTATGGTGTTCCTGAAAACCCAGAATTCACTGTTGGCTTGGGTGTAACTTTGAGCAAGTTGAAGATGGAGGTTCTCAGGGATGGTATGTCCACCCTTTTGTTGACTGGTATGGGCGGATTGGGCAAAACAACTTTGGCTACAAAGCTCTGTAGGGATGAAGAAGTCAAGGGTAAATTCAAGGAAAATATTTTATTTATCACCTTCTCACAAACGCCTAACTTAAAGAATATCGTAGAGAAACTATTTGAACATTGTGGATACCAAGTGCCTGAGTTTCTAAGTGATGAAGATGCAATTAAACGGTTGGGAATTTTGCTGCGGAAAATTGAGGGAAGTCCACTGTTGTTGGTCCTGGATGATGTTTGGCCAGGCTCAGAAGCCCTCGTTGAGAAATTTAAATTCCAGATGTCGGATTATAAAATTTTGGTGACTTCAAGGGTTGCATTTCCTAAATTTGGCACTCCATATATCTTAAAACCTCTTGCTCATGAAGATGCAATGACCCTTTTCCGTCACCATGCTGTCTTGGAAAAAAGCAGTTCAAGTATTCCTGTCGAACTTGCCCAAAAGGTTTTGAGATATTGCAAGGGTTTACCGCTTGCCATTAAAGTAATTGGTAGATCACTCAGTCATCGGTCTATTGAGTTGTGGCAAAAGACGGTGGAGGAATTGTCACAAGGTCATTCTATACTTGATTCTAGTACCGAATTACTTACATGCCTCCAAAAGCTCTTGGATGTTTTGGAAGATAATCCCAACATTAAGAAGTGCTTCATGGACCTTGGATTATTTGCTGAAGACCAAAGAATTCCTTTTCCTGCTCTCATTGATATGTGGGCAGAGTTATATGGATTAGATGATGACGGCATAGAAGCAATGGAAATCGTAAAAAAATTCGACTCCATGAATCTGGCTAATGTTTTAGTAGCAAGGAAAAATACAAGTGACTCAGACAATTACTACTACAATAACCACTTTGTTATCCTCCATGATCTTCTAAGAGATCTTGCAATTTATCAGAACAACCAGGAACCAATTGAACAGAGAAAAAGACTGATATCTGGCATAGATGAAAATAAAGGTGAAAGGTGGCTTGGGGAGAAGCAACAAGGCTTGCTGGCCGGCATATTTTCAAAATATTGCAGATGGTGTGTTAGACAGACTCTCAAACAGGTCCCAGCCCGCACATTGTCTCTATCAACTGATGAAACTTGTGCTTCATATTGGTCCCACATACAGCCATCCCAAATTGAAGTTCTGATTTTAAATGCTCGAACTAAACAGTACTGCTTTCCAGAGCACGTGGAGAAAATGAGTAAACTAAAAGTTTTGATTGTGACAAATTATGGTATTCATCCTTCTGCACTGAACAATTTCAAACTACTAGGCTCTGTATCAAACCTGAAAAGAATCAGACTAGAGCGGATATCTGTTCCTCAATTAGGGGCATTGAAAAATCTTAAAAAATTATCCCTCTACATGTGTAGCAATATAACTCAGGCTTTTAAAAATGGTACCATCCTAGTTTCAGATTCATTTCCAAGTCTAGTAGATTTGAGCATTGACTATTGCAAGGATATGGTGGGATTGCCTACTGGGATCTGTGATATTACCCCACTAAAGAAGCTCAGCATTACTAATTGCCACAAGCTTAGTTCTCTGCCCCAAGAAATTGGAAAGTTGGTGAATTTGGAACTCCTGAACCTAAGTTCCTGCACTGATTTGGAAGGGATACCAGATTCTATTGGAAACCTTTCAAAGCTAAGACTTCTTGACATCTCAAACTGCATAAGCCTTCCTTGTTTACCGGAGGATATCGGTAATCTAGGTAATCTAAGAAATCTCTACATGACAAGTTGTGCGAGGTGTGAATTGCCATACTCAATTGCCAATCTTGAGAATTTAAAGGAAGTTGTATGCGATGAAGAGACGGCTGCTTCATGGGAAGCATTCGAAGCCATTCTTCCCAATCTGAATTTAGAGGTTCCTCAAGTTGATATGCTAATGGAAAATTTTCTACGTTCGAAGGAATATTGGGGCCTTGTGGAGAACAAGATACCTGTAGCAACAAGTGCTACATTGAGTGAAGCTGAACGCAAGGTGATCAAGGATGCTAAGTTGAAGGACTTGAAGATCGAAATATTACGGAGATCATTCTCGACAAAGACACAACAAAAAAAATACCAAGGCTCTACTAAGGTGAAGAGGGCACAATTGCAAGCACTTCGGAGGGACTTTGAGAATCTTCATATGAAGGAAGGAGAGAGTGTTGATGATTTCTTTGCTCATATTCTTACTATAGCCAACAGAATGAAGGCTCACGGCGAGAATATGGGTCAAACCATCATCAATGAGAAAATTTTGAGGTCCATGACTTCAAAATTTGACTATGTGGTA 2862 0.4025 MGVTKQFVTLSTRFQEAMRMVLDIVERGRKNKRNKRILKSILKDMTPLVQEIKQYNEHLNPPREEINILIKEKDAGEALACYSCSRNIWWSKFLSWLPLYGDGLWHNRSDSLAAADKQVKDIKNTLYKVREILELLDIENFEQKLKGVGTPIKCPYGVPENPEFTVGLGVTLSKLKMEVLRDGMSTLLLTGMGGLGKTTLATKLCRDEEVKGKFKENILFITFSQTPNLKNIVEKLFEHCGYQVPEFLSDEDAIKRLGILLRKIEGSPLLLVLDDVWPGSEALVEKFKFQMSDYKILVTSRVAFPKFGTPYILKPLAHEDAMTLFRHHAVLEKSSSSIPVELAQKVLRYCKGLPLAIKVIGRSLSHRSIELWQKTVEELSQGHSILDSSTELLTCLQKLLDVLEDNPNIKKCFMDLGLFAEDQRIPFPALIDMWAELYGLDDDGIEAMEIVKKFDSMNLANVLVARKNTSDSDNYYYNNHFVILHDLLRDLAIYQNNQEPIEQRKRLISGIDENKGERWLGEKQQGLLAGIFSKYCRWCVRQTLKQVPARTLSLSTDETCASYWSHIQPSQIEVLILNARTKQYCFPEHVEKMSKLKVLIVTNYGIHPSALNNFKLLGSVSNLKRIRLERISVPQLGALKNLKKLSLYMCSNITQAFKNGTILVSDSFPSLVDLSIDYCKDMVGLPTGICDITPLKKLSITNCHKLSSLPQEIGKLVNLELLNLSSCTDLEGIPDSIGNLSKLRLLDISNCISLPCLPEDIGNLGNLRNLYMTSCARCELPYSIANLENLKEVVCDEETAASWEAFEAILPNLNLEVPQVDMLMENFLRSKEYWGLVENKIPVATSATLSEAERKVIKDAKLKDLKIEILRRSFSTKTQQKKYQGSTKVKRAQLQALRRDFENLHMKEGESVDDFFAHILTIANRMKAHGENMGQTIINEKILRSMTSKFDYVV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5116g00002 954 Pfam NB-ARC domain 183 382 IPR002182 GO:0043531
Mupr5116g00002 954 Gene3D Ribonuclease Inhibitor 540 809 IPR032675 -
Mupr5116g00002 954 Gene3D - 395 496 IPR036388 -
Mupr5116g00002 954 Pfam gag-polypeptide of LTR copia-type 881 953 - -
Mupr5116g00002 954 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 820 IPR039203 GO:0050832
Mupr5116g00002 954 Gene3D - 316 392 IPR042197 -
Mupr5116g00002 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 416 IPR027417 -
Mupr5116g00002 954 Gene3D - 149 304 IPR027417 -
Mupr5116g00002 954 Coils Coil 386 406 - -
Mupr5116g00002 954 PRINTS Disease resistance protein signature 738 754 - -
Mupr5116g00002 954 PRINTS Disease resistance protein signature 263 277 - -
Mupr5116g00002 954 PRINTS Disease resistance protein signature 186 201 - -
Mupr5116g00002 954 PRINTS Disease resistance protein signature 350 364 - -
Mupr5116g00002 954 SUPERFAMILY RNI-like 584 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5116g00002 Mupr-Chr5116 8261 13357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5116g00002 191 785 WRKY Transcription Factor Family AT5G45050 22.405 4.93e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5116g00002 - - gmx:100800632 1294.64