Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr5109g00001 | ATGAATAGACATTATATTTCCAATTCCAGGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTAGAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATCAAAAGGAAGCCAGAAATTGATGCTTATGACACTACTGGCCGGAAGCTTGATGATATTCCTTTGGTAGGACAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGTCTGGTGAAGTACTCATTGATGGTATCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTCAGCCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAGAATATTGCCTATGGCAAGGATGGGGCAACAGATGAAGAAATCAGAGCTGCAGCAGAACTTGCTAATGCTGCCAAATTTATAGATAAACTTCCTCAGGGGCTAGACACAATGGTTGGTGAGCATGGTACTCAGCTCTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAAAGATCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATCGTACAGGAGGCATTGGACAGAATAATGATAAACAGAACAACGGTCATTGTAGCCCACCGCTTAAGTACTATAAGAAATGCTGATAACATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCAAGGATCCTGATGGAGCCTATAGCCAACTCATCAGACTCCAAGAAATTAGGAGGTCAGATAAAAATGTAGACGACAGAGACAAACTGGAGAGTATAGTGCATTCCGGAAGACATTCAAGTCAAAGGTCTTCTTTCATACGATCTATAAGCCAAGAGTCATTGGGAGTTGGAAACAGTGGTCGTCATTCATTCTCAGCATCATTTGGTGTTCCCACAGCAATTGGCTTCACAGAACCTACAGGTGGAGGGCCTCAAGAACCTCCTTCAGCAGCTCCTTCACCACCAGAAGTGCCTCTTTCTCGCCTGGTTTATTTAAACAAGCCAGAGATTACAGTGATATTGATGGGGACTGCAGCTGCAGTGATAGCTGGAGCAATATTACCTGTTTTTGGGCTGTTGCTTTCCAAAATGATAAGTATTTTCTATGAGCCAGCTCATGAACTTCGTAAAGATTCAAAAGTTTGGGCATTAGTATTTGTTGGGTTTGCTGTGCTATCATTGCTGGCTTATCCAGGTAGATTCTACTTTTTTGGTGTTGCTGGCAGTAAGTTGATCAAAAGGATCCGGAAAATGTGTTTTAAGAAAGTAGTTCACATGGAAGTAAGTTGGTTTGATGAAGCTGAGAATTCAAGTGGAGCAATTGGAGCAAGGCTCTCTACTGATGCAGCTTCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTGGAGCAATAACTGGTTTGAGATTGTATGAGGAAGCAAGTCAAGTGGCGAATGATGCAGTGGGAAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTGATGGAATTGTACCAGGAAAAATGTGAAGGACCAATTAAGACGGGCATAAAGCGAGGGATAATAAGTGGAATTGGTTTTGGACTATCATTCTTCGTGTTGTATGCAGTTTATGCAACCAGTTTTTATGCTGGAGCTCGACTGGTAGAGGATGGCAAAACATCATTCACAGATGTCTTTCGCGTCTTTTTTGCTCTCAGTATGGCATCTATAGGAATCTCTCAATCTGGATCTTTGGTCCCTGATTCAACTAAAGCAAAAAGTGCTGCTGCTTCCATATTTGCTATTATTGACCGAAAGTCACAAATAGACCCTAGTGATGACTCTGGAATAACATTGGAAGAAGTCAAGGGAGAAATTGAACTTAAGCATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACCATTCATAGCGGCAAGATGGGCCTTGTGAGCCAAGAGCCTGTGCTGTTTAATGACACTATCCGCGCCAATATTGCATATGGAAAAGGAGATGCAACCGAGTCAGAAATTATAGCTGCAGCTGAATTGGCAAACGCACATAACTTCATTAGTAGTTTGCAAAAGCGTGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTGCTACTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTAGACCGTGTTATGATGGACCGAACCACAATAGTAGTGGCTCATAGGTTATCCACAATTAAGGGTGCGGATTTAATTGCAGTAGTTAAAAATGGGGTCATAGCAGAGAAGGGAAAGCATGAAGCATTGCTCAACAAAGGAGGTGACTATGCTTCCTTATCTTCCATCAAGAAAATGGCAGAGGATATCAACTTGAATGGAGATTCTGACATCAAGCAAGATTCAAAGAGTAAGGCCAAAGATGAAGCTGCCAAAACAGTACCCTTGTACAAGCTTTTCTCATTTTCTGATCCTTTGGATCATTTGTTGATGTTTGTGGGGACTATTGGTGCTATTGGGAATGGAATCTCCTTGCCCTTGATGACTTTAATATTTGGAAATATGATCAATGCATTTGGAGGATCCAAAAACTCCAACCAAGTTGTTGATGAAGTTTCCAAGGTGGGACAGTTCTTACAGTTCATGGCAACTTTCATTGGAGGTTTTGTAGTAGCATTCATCAAGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACCTCTTGTTTTGTGTGGTGCTATGATAAGCCTGGTTATTTCAAAAGCATCATCCACTGGACAAGCAGCTTATTCTATAGCAGCAAGTGTAGTAGAACAGACAATAGGTTCCATAAGAACTGTTGCATCATTCACTGGGGAGAAGCAAGCTATAGCTAAATATAATCAGTCCTTAATCAAAGCTTACAAGGCTGGAGTGCAAGAGGCACTAGCTTCTGGTTTGGGTTATGGTTTGGCTATATGGTTTGGTGCAAAAATGATAATAGAGAAAGGATATACAGGAGGAGAGGTTGTGACAGTAATTATTGCTGTATTGACTGGCTCCATGTCTCTTGGGCAGGCATCTCCAAGCGTTAGTGCTTTTGCTGCTGGCCAAGCTGCAGCCTTCAAGATGTTTGAAACAATTAAGAGGAAACCAGAAATTGATGCTTATGACACTACTGGTCAGGAGCTTGATGACCTTCGTGGAGATATAGAATTTAGGGAG | 3297 | 0.4177 | MNRHYISNSRSLGQASPSLSAFARGQAAAFKMFETIKRKPEIDAYDTTGRKLDDIPLVGQSGSGKSTVVSLIERFYDPQSGEVLIDGINLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADNIAVIHQGKIVERGSHAELTKDPDGAYSQLIRLQEIRRSDKNVDDRDKLESIVHSGRHSSQRSSFIRSISQESLGVGNSGRHSFSASFGVPTAIGFTEPTGGGPQEPPSAAPSPPEVPLSRLVYLNKPEITVILMGTAAAVIAGAILPVFGLLLSKMISIFYEPAHELRKDSKVWALVFVGFAVLSLLAYPGRFYFFGVAGSKLIKRIRKMCFKKVVHMEVSWFDEAENSSGAIGARLSTDAASVRALVGDALGLLVQNIAGAITGLRLYEEASQVANDAVGSIRTVASFCAEDKVMELYQEKCEGPIKTGIKRGIISGIGFGLSFFVLYAVYATSFYAGARLVEDGKTSFTDVFRVFFALSMASIGISQSGSLVPDSTKAKSAAASIFAIIDRKSQIDPSDDSGITLEEVKGEIELKHVSFKYPTRPDVQIFRDLCLTIHSGKMGLVSQEPVLFNDTIRANIAYGKGDATESEIIAAAELANAHNFISSLQKRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMMDRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLNKGGDYASLSSIKKMAEDINLNGDSDIKQDSKSKAKDEAAKTVPLYKLFSFSDPLDHLLMFVGTIGAIGNGISLPLMTLIFGNMINAFGGSKNSNQVVDEVSKVGQFLQFMATFIGGFVVAFIKGWLLTVVMLSCIPPLVLCGAMISLVISKASSTGQAAYSIAASVVEQTIGSIRTVASFTGEKQAIAKYNQSLIKAYKAGVQEALASGLGYGLAIWFGAKMIIEKGYTGGEVVTVIIAVLTGSMSLGQASPSVSAFAAGQAAAFKMFETIKRKPEIDAYDTTGQELDDLRGDIEFRE | 1099 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr5109g00001 | 1099 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 601 | 812 | IPR003439 | GO:0005524 | |
| Mupr5109g00001 | 1099 | FunFam | ABC transporter B family member 1 | 45 | 263 | - | - | |
| Mupr5109g00001 | 1099 | Pfam | ABC transporter | 56 | 191 | IPR003439 | GO:0005524 | |
| Mupr5109g00001 | 1099 | Gene3D | ABC transporter type 1, transmembrane domain | 8 | 48 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | Gene3D | ABC transporter type 1, transmembrane domain | 842 | 902 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | Gene3D | ABC transporter type 1, transmembrane domain | 496 | 632 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | Gene3D | ABC transporter type 1, transmembrane domain | 903 | 1084 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 352 | 626 | - | - | |
| Mupr5109g00001 | 1099 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 632 | 811 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | SMART | AAA_5 | 604 | 795 | IPR003593 | GO:0016887 | |
| Mupr5109g00001 | 1099 | SMART | AAA_5 | 51 | 237 | IPR003593 | GO:0016887 | |
| Mupr5109g00001 | 1099 | Pfam | ABC transporter | 640 | 743 | IPR003439 | GO:0005524 | |
| Mupr5109g00001 | 1099 | MobiDBLite | consensus disorder prediction | 323 | 343 | - | - | |
| Mupr5109g00001 | 1099 | SUPERFAMILY | ABC transporter transmembrane region | 847 | 1079 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | Pfam | ABC transporter transmembrane region | 498 | 591 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Mupr5109g00001 | 1099 | Pfam | ABC transporter transmembrane region | 902 | 1046 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Mupr5109g00001 | 1099 | Pfam | ABC transporter transmembrane region | 362 | 495 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Mupr5109g00001 | 1099 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 53 | 262 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 23 | 260 | IPR003439 | GO:0005524 | |
| Mupr5109g00001 | 1099 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 860 | 1056 | - | - | |
| Mupr5109g00001 | 1099 | ProSitePatterns | ABC transporters family signature. | 163 | 177 | IPR017871 | GO:0005524|GO:0016887 | |
| Mupr5109g00001 | 1099 | Gene3D | - | 57 | 275 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | FunFam | ATP-binding cassette protein subfamily B, member 2, putative | 537 | 640 | - | - | |
| Mupr5109g00001 | 1099 | Gene3D | ABC transporter type 1, transmembrane domain | 281 | 495 | IPR036640 | GO:0005524|GO:0016020 | |
| Mupr5109g00001 | 1099 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 362 | 1060 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
| Mupr5109g00001 | 1099 | PANTHER | ABC TRANSPORTER B FAMILY | 341 | 494 | IPR039421 | - | |
| Mupr5109g00001 | 1099 | Gene3D | - | 1085 | 1098 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | Gene3D | - | 633 | 672 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | Gene3D | - | 673 | 814 | IPR027417 | - | |
| Mupr5109g00001 | 1099 | SUPERFAMILY | ABC transporter transmembrane region | 349 | 627 | IPR036640 | GO:0005524|GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr5109g00001 | Mupr-Chr5109 | 108 | 8748 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr5109g00001 | 841 | 929 | Calmodulin-binding Proteins | AT2G36910 | 33.333 | 2.95e-09 | 59.7 |