Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5097g00004 ATGGTCAATCCCAACCCAAGAACTCTCTGTTTCGTCATTGTCCAACAAGGCCTATTGTGGATTATATTCAAGCGCAGCATGATCATTGAGTTGAGGCAAGGGCTCTTGATTTCCTCCAATAAGACCATTGAGGGCCTTGGTGCGAATATGCAGATCAAGAATAGCGATGGCCTCACCATGAACTCCTACACCCACTTTGGGTTGAGGATAAGGAGTGACGGTGACAATGACGCCATCTCCATATTTGGAGCTTCCAATATTTAG 264 0.4583 MVNPNPRTLCFVIVQQGLLWIIFKRSMIIELRQGLLISSNKTIEGLGANMQIKNSDGLTMNSYTHFGLRIRSDGDNDAISIFGASNI 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5097g00004 87 PANTHER PECTATE LYASE 18-RELATED 1 64 IPR045032 GO:0030570
Mupr5097g00004 87 SUPERFAMILY Pectin lyase-like 2 87 IPR011050 -
Mupr5097g00004 87 Gene3D - 1 87 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5097g00004 Mupr-Chr5097 25928 26264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5097g00004 1 87 Polysaccharide Lyase AT5G15110 41.071 1.02e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5097g00004 K01728 - gmx:100785801 90.5077