Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5091g00002 ATGCCACACAGAAAAGGTTTCAGCCTTGTGAATGACCCTCGTCTTGTAGCCAGGAAATTCTTGGCCAGACCTCAGTATGAGGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTCGATCCCTTCCTTGTGTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCTCATAGAGGCTTTGAGACGGTCACATACATGTTGCAGGGAGCTATAACGCATGAAGACTTTGAAGGACATAAGGGGACAATAGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATACTCCACTCAGAAATGCCTGCAGCTCAAGGAACTCAAAAGGGTCTTCAGTTGTGGATCAACCTAGCTTCCAAGTATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGCAGAAGCTGAGGATGATGGCATCAAGGTTAGAGTTATAGCTGGGGAAGCACTAGGGATAAAGTCTCCAATCTACACAAGGACACCAACCATGTTCTTGGACTTCTCTCTCAAACCTGGTGGTCACTTGCAACAACCTATACCAAAATCTTGGAATGCTTTTGTCTATATATTGGAAGGAGAGGGTATATTTGGAAACCTGAAATCTCAGCCTGCAAACTCTCACCATATTCTTCTTCTTGGTTCTGGTGATGGCCTAGAGGCATGGAATAAATCTTCTAAGCTTCTTAGGTTCATTTTGGTTGGAGCAGAGCCTCTGGGGGAACCTCTAGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGACATTGGAGATCAGAAAGCGCAGTTAATCTTGATTAA 903 0.4374 MPHRKGFSLVNDPRLVARKFLARPQYEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGILHSEMPAAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEAEDDGIKVRVIAGEALGIKSPIYTRTPTMFLDFSLKPGGHLQQPIPKSWNAFVYILEGEGIFGNLKSQPANSHHILLLGSGDGLEAWNKSSKLLRFILVGAEPLGEPLVQFGPFVMNTQEEIDQTIDDFENFANGFEKARHWRSESAVNLD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5091g00002 300 CDD cupin_pirin_C 176 252 - -
Mupr5091g00002 300 PIRSF Pirin 12 292 IPR012093 -
Mupr5091g00002 300 FunFam pirin 27 162 - -
Mupr5091g00002 300 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Mupr5091g00002 300 Gene3D Jelly Rolls 148 253 IPR014710 -
Mupr5091g00002 300 CDD cupin_pirin_N 31 128 - -
Mupr5091g00002 300 Pfam Pirin 33 126 IPR003829 -
Mupr5091g00002 300 SUPERFAMILY RmlC-like cupins 15 293 IPR011051 -
Mupr5091g00002 300 Gene3D Jelly Rolls 27 279 IPR014710 -
Mupr5091g00002 300 PANTHER PIRIN-RELATED 11 295 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5091g00002 Mupr-Chr5091 13515 16907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5091g00002 13 289 Calmodulin-binding Proteins AT3G59220 59.857 4.84e-126 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5091g00002 K06911 - gmx:100802484 572.392