LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr5083g00002	GCGTGGGTTAATCAGACTGGCACATATAGAGCAACACCCTTCGAGTTGCGTTTCATTAGTAAATTGCCCGGTACAATTTTTTCCTACTCCAACATGATAGCAGAGGATAAAACACCCATTCAAATTGCTATCTTTGATGTTAGAGATCAGTCGGTGCTTAATGTTGGTCCCTTATCCTCTATGAAGGTAGAGATCTGTGCTCTCAATGGCGAGTTCGGTTTCAATGGAAGCGAGGATTGGACTGAAGAAGAATTTAATGTCAATATCTTGCGCGAGAGAGAAGGCAAAAGGCCATTATTGAATGGAGATAGATTTGTTACTCTAAAAAATGGAGTAGGTTGTATTAACAAGGTTATGTTCACGGATAACTCAAGATGGATTAGAAGCAGGAAGTTTAGGTTGGGAGCCAAAGTTGTGCAACCAACTTCCAACGAAGCAAATATCAAGGAAGGTAGAAGCGAACCTTTTGTGGTCAAAGATTACAGAGGAGAGTCATACAAGAAACACTACCCTCCTTGCTTGAATGATGATGTTTGGCGTTTAGAGCAAATTGCCAAAGACGGAAAAATCCACAAGAGACTATCTCAGCTCCATGGAATTCACACTGTTAAAGATCTCTTGCGGTTATACACAACAAACTCATCTTCATTACTTGAGAAGGTTGGTAAAATTCCGAAGAGGTCGTGGATAGCAATTATTGAACACGCCAAGACTTGTGTGATAGATGATGACAAGACATTCGTTTACCACACAGCAGAACAATCGACAAGCCTGTTTTTCAACTCCATCTACGTCCTTCTAGGTGTGACGTTTGATGGCCAAAATTATCGTTCTCTCGACACTCTCACCCCCGGCGAGAAGCATTTGGTGGAAATGTTGAAGCAACGTGCTTACAAAAATGTGGATAATTTCAAATCAATTGATGAGACATCACTGAGCTGCTTAAGACCATTGGAGCAAGGTCTTCAACAGTATAATAATATCTCTTCCACACAAAATGGAACATGGGCTGGTTATGGTCAACCACATGCCTCAACTTCATATATAAATGAAGGCGTACAAAATTACCAAACCTACGTTGATCCAGTGCCAGACATAACAGACATGCCATTGAACAATCCTTATGCCATCGGTTCAATGAAGGAGTACACGAAGGATTATTTCTCTGGATTGTGCATTGAAGGGGATAGTTGGGTCCCT	1200	0.4125	AWVNQTGTYRATPFELRFISKLPGTIFSYSNMIAEDKTPIQIAIFDVRDQSVLNVGPLSSMKVEICALNGEFGFNGSEDWTEEEFNVNILREREGKRPLLNGDRFVTLKNGVGCINKVMFTDNSRWIRSRKFRLGAKVVQPTSNEANIKEGRSEPFVVKDYRGESYKKHYPPCLNDDVWRLEQIAKDGKIHKRLSQLHGIHTVKDLLRLYTTNSSSLLEKVGKIPKRSWIAIIEHAKTCVIDDDKTFVYHTAEQSTSLFFNSIYVLLGVTFDGQNYRSLDTLTPGEKHLVEMLKQRAYKNVDNFKSIDETSLSCLRPLEQGLQQYNNISSTQNGTWAGYGQPHASTSYINEGVQNYQTYVDPVPDITDMPLNNPYAIGSMKEYTKDYFSGLCIEGDSWVP	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr5083g00002	400	PANTHER	OS02G0177800 PROTEIN	12	356	IPR012416	GO:0005516
	Mupr5083g00002	400	Pfam	Calmodulin binding protein-like N-terminal domain	15	160	IPR046831	-
	Mupr5083g00002	400	Pfam	Calmodulin binding protein C-terminal domain	245	306	IPR046829	-
	Mupr5083g00002	400	Pfam	Calmodulin binding protein central domain	174	239	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr5083g00002	Mupr-Chr5083	9213	10958	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr5083g00002	14	312	Calmodulin-binding Proteins	AT5G26920	43.854	2.74e-79	248

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr5083g00002	-		-	gmx:100806598	633.639