Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5073g00006 ATGCAAGAATGCGTGACAGCCCCAACAACAACAACAACATCGTACCGTGGGGTTCGACAACGAAAGTGGGGGAAATGGGTGTCGGAAATCCGCGAGCCAGGGAAGAAGAGCAGAATATGGTTAGGGAGCTACGAGGCGCCGGAGATGGCAGCGGCGGCATATGACGTGGCGGCGTTGCACCTTCGAGGACGCGCCGCCAGGCTCAATTTTCCGGAATTGGCTGAGACTCTGCCGCGTCCGGTCAGTTCCAAACCCGAGGATGTACAGGTGGCTGCACAGCAAGCGGCGTTGAGGTTCAGAAGATCACCGTCTGGTGAGAGTAATGATAATAATAGTAATGGTAATATTCCTGTGAGGGTGGGACTATCAGCCACACAAATTGAGGCCATCAATGAGTCCCCATTGGATTCACCCAAGATGTGGATGATGCAAATGGCTGAGGCTCTCAGGTTTGGGTTTGATGACTCTATGATGATGCTCTGTTGTCATCATGACTACGCTTCCGAGTTGAGTGGATGGGAAGAAATTCAACATGAATCTTTGTGGGACTCTCCCCAATATATAGCAAAATTTATCTTTTATCGCCTGTAA 591 0.5042 MQECVTAPTTTTTSYRGVRQRKWGKWVSEIREPGKKSRIWLGSYEAPEMAAAAYDVAALHLRGRAARLNFPELAETLPRPVSSKPEDVQVAAQQAALRFRRSPSGESNDNNSNGNIPVRVGLSATQIEAINESPLDSPKMWMMQMAEALRFGFDDSMMMLCCHHDYASELSGWEEIQHESLWDSPQYIAKFIFYRL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5073g00006 196 MobiDBLite consensus disorder prediction 100 118 - -
Mupr5073g00006 196 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Mupr5073g00006 196 PRINTS Ethylene responsive element binding protein signature 53 73 IPR001471 GO:0003700|GO:0006355
Mupr5073g00006 196 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Mupr5073g00006 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 145 - -
Mupr5073g00006 196 MobiDBLite consensus disorder prediction 99 118 - -
Mupr5073g00006 196 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Mupr5073g00006 196 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Mupr5073g00006 196 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Mupr5073g00006 196 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Mupr5073g00006 196 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Mupr5073g00006 196 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5073g00006 Mupr-Chr5073 40853 41859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5073g00006 13 183 AP2-EREBP Transcription Factor Family AT1G71450 50.286 1.54e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr5073g00006 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5073g00006 - - gmx:100788567 277.715