Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5062g00003 ATGGCAATAACACCTTTTGGTAGTACATCTGCTGCACAATGGGGAATTCATCCTCAGCTATTACTAAGATCCAGCATCAGAGGCAAGGTTGCATCATCCAGCCACAATGTTACCAGCAGGGTAAGTTTTATGGCTGCACCAAGCTCAAGCTTTTTTTCTCGAGATTCCACACCACTCAATGTGGGTTCGCCCCAAACTTTTAATCGTCGCAAGGGATCAAGGTTGATTGTTAGAGCAGATGCAGATTATTATTCTGTCCTTGGGGTTTCAAAAAATGCTAGTAAATCTGAAATTAAGACTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTCAACAAAGAACCTGGAGCTGAACAAAAATTTAAGGAAATTAGCAACGCATATGAGGTGTTATCAGATGATGAGAAACGATCTATATATGACAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGGATGGGGGATTTCAGCAATCCATTTGATCTGTTTGAATCACTGTTTGAGGGCATGAATCGTGGCGGAGGTTCCAGAGGTTCTTGGAATGGAGCAATTGATGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGTATAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTTGCAACGGTTCAGGGGCTAAACCAGGGACTACACCATCCAGATGTAGCACTTGTGGAGGTCAAGGCCGGGTTGTCTCATCAACAAGAACTCCATTAGGCATTTTCCAGCAGTCAATGACATGCTCTTCATGCAATGGGACTGGAGAAATTTCAACACCTTGCAATACATGTTCTGGGGATGGTCGGGTGAGGAAATCAAAGCGGATAAGTTTGAAGGTCCCAGCTGGTGTGGACTCTGGTAGTCGTCTAAGGGTCCGAAATGAGGGGAATGCCGGAAGAAGAGGTGGTTCCCCTGGTGACCTCTTTGTGGTTATCGAGGTTATCCCAGATCCTGTCCTTAAGCGAGATGACACCAACATCTTATACAGCAGCAAGGTTTCATATATTGATGCAATCCTGGGGACTACAATTAAGGTTCCTACTGTAGACGGAATGGTGGATTTAAAAATTCCTGCTGGGACACAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTGAATAAAAACAACATGAGGGGTGATCAGTTGGTTCGTGTGCAAGTTGAAATCCCCAAAAGACTGAGCAATGATGAGAGAAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCCACCGGCGGAGATGAAGAGCAGAAGAAATTAGAGATCTTTTTCTTCGTTGGAACTTATACTTCTATTATCTGGATTGATTGTTCTCAGCATGAGGCCATTATTGACTGTATTGGATATTAC 1419 0.4334 MAITPFGSTSAAQWGIHPQLLLRSSIRGKVASSSHNVTSRVSFMAAPSSSFFSRDSTPLNVGSPQTFNRRKGSRLIVRADADYYSVLGVSKNASKSEIKTAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGGGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYSSKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPFLNKNNMRGDQLVRVQVEIPKRLSNDERKLIEELADLSKGKTATGGDEEQKKLEIFFFVGTYTSIIWIDCSQHEAIIDCIGYY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5062g00003 473 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Mupr5062g00003 473 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 46 433 - -
Mupr5062g00003 473 SUPERFAMILY Chaperone J-domain 79 179 IPR036869 -
Mupr5062g00003 473 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Mupr5062g00003 473 FunFam Chaperone protein dnaJ A6 chloroplastic 79 182 - -
Mupr5062g00003 473 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 287 IPR036410 -
Mupr5062g00003 473 FunFam Chaperone protein dnaJ 1, mitochondrial 330 437 - -
Mupr5062g00003 473 Pfam DnaJ C terminal domain 195 410 IPR002939 -
Mupr5062g00003 473 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 343 IPR008971 GO:0006457|GO:0051082
Mupr5062g00003 473 Gene3D DnaJ domain 79 183 IPR036869 -
Mupr5062g00003 473 ProSiteProfiles Zinc finger CR-type profile. 207 288 IPR001305 GO:0031072|GO:0051082
Mupr5062g00003 473 SMART dnaj_3 81 138 IPR001623 -
Mupr5062g00003 473 PRINTS DnaJ domain signature 118 138 IPR001623 -
Mupr5062g00003 473 PRINTS DnaJ domain signature 102 117 IPR001623 -
Mupr5062g00003 473 PRINTS DnaJ domain signature 84 102 IPR001623 -
Mupr5062g00003 473 PRINTS DnaJ domain signature 138 157 IPR001623 -
Mupr5062g00003 473 FunFam Putative Mitochondrial DnaJ chaperone 275 325 - -
Mupr5062g00003 473 CDD DnaJ_C 191 413 - -
Mupr5062g00003 473 Pfam DnaJ domain 82 143 IPR001623 -
Mupr5062g00003 473 Gene3D - 330 442 - -
Mupr5062g00003 473 Gene3D - 220 283 - -
Mupr5062g00003 473 Pfam DnaJ central domain 220 283 IPR001305 GO:0031072|GO:0051082
Mupr5062g00003 473 CDD DnaJ 82 135 IPR001623 -
Mupr5062g00003 473 FunFam Molecular chaperone DnaJ 212 288 - -
Mupr5062g00003 473 CDD DnaJ_zf 220 283 IPR001305 GO:0031072|GO:0051082
Mupr5062g00003 473 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 421 IPR008971 GO:0006457|GO:0051082
Mupr5062g00003 473 Hamap Chaperone protein DnaJ [dnaJ]. 79 452 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr5062g00003 473 NCBIfam molecular chaperone DnaJ 82 426 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr5062g00003 473 Gene3D - 190 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5062g00003 Mupr-Chr5062 12233 18249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5062g00003 83 143 C2H2 Transcription Factor Family AT1G74250 44.776 4.02e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5062g00003 K03686 - gmx:100811006 810.831