Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5059g00001 ATGGCCAGAACTCCTTGTTGTGAGAAGATGGGCTTGAAGAAGGGACCTTGGACACCCGAAGAAGATCAGATATTGATTTCTCATATTCAACGATATGGCCATGGAAACTGGAGGGCCCTTCCTAAACAAGCTGGTTTGTTAAGGTGTGGTAAGAGTTGTAGACTTCGTTGGATAAATTACTTGAGGCCAGATATTAAACGAGGGAAATTCAGCAAGGAAGAAGAAGATATCATCATCAAACTACATAGAGTTCTTGGAAATAGGTGCGGATGGGCAACTATTGCGACAAGATTACCAGGACGAACTGACAACGAAATAAAGAATTTTTGGCACACCCATTTGAAGAAGAGGGTTGAGAGAGGTGAAGTGCAGAATATGATGAATCCCTTTGAAGAGGCACAAGGAGCTTCTAGTGCAGGGATTTTAATGAATATGCCACAAGTAGGTGTGGATGCTTCAGGTGCTACTTCTAGTGTCACTGAGAAAGTATTGATTGCCAATGATAGTTTACTCTCAAGGAGAAATATTCCACCTATTGTAGGTCTAGGATTTTATGGCGCCGTCTCTTCTAATGTTTCAGGAGAAATAATTGCCAATAATTCTCATAGTGAAATCGGTGAAGAAATGGAATTTTGGTATAATATGTTTATGAACAATCATCACAAGGGTACTAAAATGTAA 681 0.3994 MARTPCCEKMGLKKGPWTPEEDQILISHIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDIIIKLHRVLGNRCGWATIATRLPGRTDNEIKNFWHTHLKKRVERGEVQNMMNPFEEAQGASSAGILMNMPQVGVDASGATSSVTEKVLIANDSLLSRRNIPPIVGLGFYGAVSSNVSGEIIANNSHSEIGEEMEFWYNMFMNNHHKGTKM 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5059g00001 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr5059g00001 226 ProSiteProfiles Myb-like domain profile. 62 114 IPR001005 -
Mupr5059g00001 226 CDD SANT 16 61 IPR001005 -
Mupr5059g00001 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 118 IPR017930 -
Mupr5059g00001 226 SMART sant 13 63 IPR001005 -
Mupr5059g00001 226 SMART sant 66 116 IPR001005 -
Mupr5059g00001 226 FunFam MYB-related transcription factor 13 66 - -
Mupr5059g00001 226 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr5059g00001 226 Gene3D - 13 66 - -
Mupr5059g00001 226 SUPERFAMILY Homeodomain-like 10 110 IPR009057 -
Mupr5059g00001 226 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 151 - -
Mupr5059g00001 226 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr5059g00001 226 Pfam Myb-like DNA-binding domain 67 114 IPR001005 -
Mupr5059g00001 226 CDD SANT 69 114 IPR001005 -
Mupr5059g00001 226 Gene3D - 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5059g00001 Mupr-Chr5059 5092 6054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5059g00001 1 219 MYB Transcription Factor Family AT2G31180 46.531 1.08e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr5059g00001 Myb_DNA-binding 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5059g00001 K09422 - gmx:100797027 320.472