Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5051g00004 ATGGCACCCAGTTTTGACTGTGTTTCGAGTCTCCTTTGCACGGAGGACAGCACCCTTTTTGACGAGAGCCATAATGAGGTGTACGAAGACACGTGGCGTCTTAGGAGGAGACACCACTTGGATGAGCCAGATGAGTTGCCATTGCTGAGTGATGAGTGCTTGGCGTTGATGGTGGAAAGGGAGTGCCAGCACTGGCCTGGTGTACGTTACTTGAATAGGCTTCAAACTGGGGATTTGGACTTTGGAGCCAGAATGGAGGCCATTCATTGGATTCACAAGGTCCGATCACATTTTGGTTTTGGTCCTCTCTGTGGATATCTATCTATAAATTACTTGGACCGATTCCTTTCTGCATATGAATTACCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTTTGGCGTGTTTATCTCTGGCGGCCAAATTAGATGAGACAGAAGTTCCACTGTGTCTTGATTTGCAGGTGGGTGAATCCAAGTTTATATTTGAGGCTAAAACCATACAGAGAATGGAACTTCTAGTACTAAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCACCTTCCTTGATTACTTCCTTTGCAAGATCAATGGTGATCAAAGCCCGTTAAGGTCATCAATTTTGCGATCTGTCCAACTTATATCAAGCACTGCAAGAGGGATTGACTTCTTGGAATTCAAACCATCAGAGGTTGCAGCAGCAGTGGCTATGTATGTCATGGGGGAAACCCAAACAGTTGACACTGGGAAAGCAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGACTATTGAAGTGTGTTAAAATGATCCACGAGTTGTCATCCAACGGTGGTTCAGTGAAGGATTTAAGTGCTTCTGTCACTTGTCTACCCCAAAGTCCAATAGGTGTGTTAGACGCTCTGTGCTTCAGCCACAAAAGTTATGACACAAATGGTGGTTCATGTGCAAATTCTTCACATAATAGCCCCGATGCTAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCTGAGCTATTGTAG 1032 0.4428 MAPSFDCVSSLLCTEDSTLFDESHNEVYEDTWRLRRRHHLDEPDELPLLSDECLALMVERECQHWPGVRYLNRLQTGDLDFGARMEAIHWIHKVRSHFGFGPLCGYLSINYLDRFLSAYELPKGRAWTMQLLALACLSLAAKLDETEVPLCLDLQVGESKFIFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINGDQSPLRSSILRSVQLISSTARGIDFLEFKPSEVAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVKMIHELSSNGGSVKDLSASVTCLPQSPIGVLDALCFSHKSYDTNGGSCANSSHNSPDAKRRKLNKTCGAELL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5051g00004 343 SMART cyclin_7 89 177 IPR013763 -
Mupr5051g00004 343 Pfam Cyclin, N-terminal domain 54 183 IPR006671 -
Mupr5051g00004 343 SUPERFAMILY Cyclin-like 41 183 IPR036915 -
Mupr5051g00004 343 FunFam D2/4-type cyclin 67 179 - -
Mupr5051g00004 343 FunFam D6-type cyclin 180 272 - -
Mupr5051g00004 343 Pfam Cyclin, C-terminal domain 186 282 IPR004367 -
Mupr5051g00004 343 Gene3D - 56 273 - -
Mupr5051g00004 343 CDD CYCLIN_AtCycD-like_rpt2 186 274 - -
Mupr5051g00004 343 CDD CYCLIN_AtCycD-like_rpt1 83 181 - -
Mupr5051g00004 343 SMART Cyclin_C_2 186 297 IPR004367 -
Mupr5051g00004 343 SUPERFAMILY Cyclin-like 168 278 IPR036915 -
Mupr5051g00004 343 Gene3D - 67 184 - -
Mupr5051g00004 343 PANTHER CYCLINS 52 278 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5051g00004 Mupr-Chr5051 50822 52645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5051g00004 57 320 Core Cell Cycle Gene Families AT2G22490 48.529 2.25e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5051g00004 K18810 - gmx:547739 585.104